PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP018702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 25270.6 Da PI: 9.2042 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.8 | 2.8e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngi+KKA+E+ vLCda+v++ii+ss+gk+ ey+s PCP018702.1 9 KRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIYSSSGKMVEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 77.5 | 3.5e-26 | 71 | 167 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 y+ +sgk+l++ak+e+l++e++++kk ++++q e+Rhl+Ged++sL++ eL+ Le++Le++l++iR+k+ +++ ++ ++ k+l++enk+L+ +l PCP018702.1 71 YHGQSGKKLWDAKHENLSNEVDRVKKDNDSMQVELRHLKGEDITSLNHLELMALEEALENGLTSIRDKQASFFH--YSYFKQSGKALEDENKRLTYEL 166 6778999*************************************************************998875..7899999999999999998776 PP K-box 99 e 99 + PCP018702.1 167 Q 167 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRRNGIIK KAKEITVLCD AKVSLIIYSS SGKMVEYCSP 60 STTLTEILDK YHGQSGKKLW DAKHENLSNE VDRVKKDNDS MQVELRHLKG EDITSLNHLE 120 LMALEEALEN GLTSIRDKQA SFFHYSYFKQ SGKALEDENK RLTYELQKQQ EMKIDENVRN 180 MENGYHQRQL GNYNNTQQQI PFAFRVQPIQ PNLQERI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 8e-83 | MIKC_MADS family protein |