PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP018665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 28070.3 Da PI: 4.3039 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.5e-19 | 108 | 157 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f+tae Aa a+++a+ +++g PCP018665.1 108 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAAFAMRG 157 9*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MDSSFFQNPN SEFSFESSSS FNSQEYFHDD HLSWNMFNSN DHHNQSAFPQ LPFNENDSEE 60 MLLYGVLAEA PSGDGNSSGS RVSSTHSKDH EEVNSSSATA DEDQVVAYRG VRRRPWGKFA 120 AEIRDSTRNG VRVWLGTFDT AEAAALAYDQ AAFAMRGSLA VLNFPVDVVH QSLVEMEYDF 180 EEGSSPVLAL KRRHSMKRRS SMNENNKLLY RNQHQKNDEE DDDQLENVVV FEDLGADYLE 240 ELLSISES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 5e-50 | ERF family protein |