PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018311.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 396aa MW: 43984.8 Da PI: 4.5062

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018311.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156	1.6e-48	8	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrF+Ptd elv++yLk+kv gk+l+ ++++evdi+k+ PwdLp k + ++++ +wyfF+++++ky+tg r++r+t+ gyWkatg+d++vl + PCP018311.1 8 LPPGFRFSPTDVELVQYYLKRKVMGKRLRY-NFVAEVDIHKYAPWDLPgKsSWQSGDLKWYFFCPTERKYPTGVRTKRTTECGYWKATGNDRSVLY-N 103 79************************99.89***********6346667788**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ge+ g ktLvf++grapkg +tdWvmheyrle PCP018311.1 104 GEVAGKIKTLVFHTGRAPKGDRTDWVMHEYRLE 136 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MGKGKSLLPP GFRFSPTDVE LVQYYLKRKV MGKRLRYNFV AEVDIHKYAP WDLPGKSSWQ 60 SGDLKWYFFC PTERKYPTGV RTKRTTECGY WKATGNDRSV LYNGEVAGKI KTLVFHTGRA 120 PKGDRTDWVM HEYRLESKDL ANRGVPQESY VLCTIFQKEG PGPRNGAQYG APLMEEDWSD 180 DEAENCSEAV PHANMPVPNL VLPSDYNSSI TTSTYTHDGI RIGPSSESCI SYVVPLSCNV 240 SQLVSSNHAT VEEPHTSEDD ILSMLACFSE ESPSLLEENE KNEELGNVIP IGNASATPHL 300 VINDTYDNLG DLGKAARVGE EGCSFSSLPN SVCAPGQIPL GDDEQYLELD DLGEPLNYRD 360 STYTQPPSMF GQPHASLGET SFQGEDQFNV FDNVNF

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MGKGKSLLPP GFRFSPTDVE LVQYYLKRKV MGKRLRYNFV AEVDIHKYAP WDLPGKSSWQ  60
SGDLKWYFFC PTERKYPTGV RTKRTTECGY WKATGNDRSV LYNGEVAGKI KTLVFHTGRA  120
PKGDRTDWVM HEYRLESKDL ANRGVPQESY VLCTIFQKEG PGPRNGAQYG APLMEEDWSD  180
DEAENCSEAV PHANMPVPNL VLPSDYNSSI TTSTYTHDGI RIGPSSESCI SYVVPLSCNV  240
SQLVSSNHAT VEEPHTSEDD ILSMLACFSE ESPSLLEENE KNEELGNVIP IGNASATPHL  300
VINDTYDNLG DLGKAARVGE EGCSFSSLPN SVCAPGQIPL GDDEQYLELD DLGEPLNYRD  360
STYTQPPSMF GQPHASLGET SFQGEDQFNV FDNVNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	7e-93	NAC family protein