PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018288.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 263aa    MW: 28482.8 Da    PI: 6.5107
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018288.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-184796255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                  ykGVr++  +g+WvAeIr+p   + r +r +lg+f++  eAa a++aa++kl+g
  PCP018288.1 47 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDSSHEAALAYDAAARKLYG 96
                 69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MLKSEMNGGG STSVGVEERK LSKRPVQASS RKGCMRGKGG PENAMCTYKG VRQRTWGKWV  60
AEIREPNRGA RLWLGTFDSS HEAALAYDAA ARKLYGSGAK LNLPEQRVPH CHQHHLNQHL  120
QNQVVPSPVN PGVPPQIPNQ TLVQNNPSGT RTNPAGYVAL VNDIAVPFIG DNFLTVKADQ  180
PHRNWAVALP EQGGSEVGEN MSSGGNNEME GILWGDTSGN FPVFDDSIWT EAAMSLDLPA  240
VEDYGVFGGG FVDGTGWETM HSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-41ERF family protein