PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018280.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 439aa MW: 48489.8 Da PI: 6.5093

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018280.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.2e-09	362	399	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+++qV +WF N R + PCP018280.1 362 FEHflHPYPNDNEKLLLASQTGLSKNQVANWFINARVR 399 564459******************************88 PP
2	BELL	99.8	2.1e-32	225	295	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++elq++ a L++lle+V++r +y++q+++vissFe+v+g g+ak+Yt+lAlka+SrhF +L+dai+++i PCP018280.1 225 KHELQARLANLITLLEQVEDRCGKYYHQMEQVISSFEMVVGEGAAKSYTALALKAMSRHFCSLRDAIVSHI 295 79******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MVSQDSPPNP SSSIFHQFII SDSISAQNHH LETQHLDAYP PSFQTSTAVP QALGVLPGIH 60 ALGERMSRSV DLVQAPTGAS VENQAQRLSL SLGSRMLVPS VQYRYNNFLI GEESGEACNP 120 GVEHVGDEYC FMGGALASHS RALNRSCSTS YGAESVAAVI ANSKYLKPAQ SLLDEIVNIG 180 GKLIDISNEK HVGKLYGEGR RGGMGLSSEL RAELSCNAGL MNADKHELQA RLANLITLLE 240 QVEDRCGKYY HQMEQVISSF EMVVGEGAAK SYTALALKAM SRHFCSLRDA IVSHIYTEKR 300 KLLQDVPKIS SGLSQLHLFD KECRHRRMSL QQLGIFQSQR QAFRPIRGLP ETSVAILRTW 360 LFEHFLHPYP NDNEKLLLAS QTGLSKNQVA NWFINARVRL WKPMIEEMYK EEFGESSEDS 420 NSLAAGSMTG EGSTDQTED

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MVSQDSPPNP SSSIFHQFII SDSISAQNHH LETQHLDAYP PSFQTSTAVP QALGVLPGIH  60
ALGERMSRSV DLVQAPTGAS VENQAQRLSL SLGSRMLVPS VQYRYNNFLI GEESGEACNP  120
GVEHVGDEYC FMGGALASHS RALNRSCSTS YGAESVAAVI ANSKYLKPAQ SLLDEIVNIG  180
GKLIDISNEK HVGKLYGEGR RGGMGLSSEL RAELSCNAGL MNADKHELQA RLANLITLLE  240
QVEDRCGKYY HQMEQVISSF EMVVGEGAAK SYTALALKAM SRHFCSLRDA IVSHIYTEKR  300
KLLQDVPKIS SGLSQLHLFD KECRHRRMSL QQLGIFQSQR QAFRPIRGLP ETSVAILRTW  360
LFEHFLHPYP NDNEKLLLAS QTGLSKNQVA NWFINARVRL WKPMIEEMYK EEFGESSEDS  420
NSLAAGSMTG EGSTDQTED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-103	TALE family protein