PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018270.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 331aa    MW: 35688.2 Da    PI: 6.5212
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018270.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.46.2e-16238274135
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg+
  PCP018270.1 238 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGS 274
                  *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MYSTGGGVTQ SNQVDDQDDD VEEPIDNPNI RFEDSTAIPP NQLYLPSSEY PPPPAANGAS  60
DQLTLSFQGE VYVFDAVSPD KVRFSAQLVQ FGIPEMSSFF FSESLIFDQL VRKGCIRSLS  120
FCGSLSQVQA VLLLLGGYEI PSGIPSMGPV PLNQQGMNDL PAKPIQPQRA ASLSRFREKR  180
KERCFDKKIR YTVRKEVALR MQRKKGQFTS SKASSDDGGP ASSTQASGQD ESMRETSCTH  240
CGISSKSTPM MRRGPAGPRT LCNACGLKWA NKGSLTGVPK VLNVGIHDPS LKGIEQSNGE  300
VQDSDVVAMG ANVAPSSANG DNPAMTVDRK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-61GATA family protein