PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018193.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 467aa MW: 51565.7 Da PI: 6.5139

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018193.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.4	1.5e-09	292	338	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er RR + N+ f Lr+++P+ K++ ++ L Av YI++L+ PCP018193.1 292 SHVEAERLRRVKFNHLFCVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 338 799*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MEAILSSFSS PNFRDNPSSS TFKQRLQFIV ESNNAVECWV YAIFWEATGD NNLSWGGGHY 60 KSSNINSYQP KLGFSDVDFV GNNDDGDVTD SEWFYFYSVS LTQSFTADNN ILGRAFCSGE 120 FVWLAGDHEF QLYECERVKE ARMHGIQTLV CIATSRGVLE LASLDVIKQD WGLVHLTKSL 180 FRSNDDDDDH NRLSNQQASR EASGLVPPLK NGRFLGAQEE LTTQEGGGNE ATPLNIGGSS 240 INIGGSSLSP PDSRSNSVGN FTSKNIENTQ SKKRGRPSSN HGAATRESQL LSHVEAERLR 300 RVKFNHLFCV LRSVVPNVSK MDRSSLLADA VAYINQLKAK VEELEGKIQA QLPPPQKSKV 360 DHNNNVINII NLEKNSSYES NRVGGCGVEV DVKIIGSSEA IIRVLCPNQD YPYARLMNVL 420 KGLGLQVSHA SISSINELMI QNVVTRLPYG FTSGKALRLG IIKGWYI

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MEAILSSFSS PNFRDNPSSS TFKQRLQFIV ESNNAVECWV YAIFWEATGD NNLSWGGGHY  60
KSSNINSYQP KLGFSDVDFV GNNDDGDVTD SEWFYFYSVS LTQSFTADNN ILGRAFCSGE  120
FVWLAGDHEF QLYECERVKE ARMHGIQTLV CIATSRGVLE LASLDVIKQD WGLVHLTKSL  180
FRSNDDDDDH NRLSNQQASR EASGLVPPLK NGRFLGAQEE LTTQEGGGNE ATPLNIGGSS  240
INIGGSSLSP PDSRSNSVGN FTSKNIENTQ SKKRGRPSSN HGAATRESQL LSHVEAERLR  300
RVKFNHLFCV LRSVVPNVSK MDRSSLLADA VAYINQLKAK VEELEGKIQA QLPPPQKSKV  360
DHNNNVINII NLEKNSSYES NRVGGCGVEV DVKIIGSSEA IIRVLCPNQD YPYARLMNVL  420
KGLGLQVSHA SISSINELMI QNVVTRLPYG FTSGKALRLG IIKGWYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46760.1	2e-36	bHLH family protein