PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP017818.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 2644aa MW: 292849 Da PI: 5.6788

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP017818.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.2	9.5e-11	607	652	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+Pk+ + +Ka++L + +eY++ Lq PCP017818.1 607 HSIAERLRREKISDRMKNLQELVPKS-----NRTDKASMLDEIIEYVRFLQ 652 99*********************7.....59***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 2644 aa Download sequence
MRRRKEAKME NPLSSHSHSR INFIDIEDDT FRFTPTSRNP SINPINVDDE DQDLRSITAS 60 LLKSVPTPAE ADNFIDLSEE TLDFYDGDDE LRILRFKPSK TPFGKRGKGL FSDFSATESG 120 QSSNSKGDPD FVCEICVEPK SGIESFRIEN CSHGYCTECM AKYVASKLQE NITSIRCPVP 180 DCIGLLEPEY CRPILPPEVF DQWGTALCEA VILGSEKFYC PYKDCSAMLI DDGKEVVRQS 240 ACPNCWRMFC AQCKAPWHEG IECEEFLKLN KDEREREDIM LKNLAQKQQW RRCPKCRFYV 300 EKSMGCMFMM CRCRTAFCYR CGDVLENIHN HYCPSCGGVS NGFHPLPVTL SSHTKSEISS 360 SSWSDVDAKE IPSWACCESE QPNEALLGSV VVVDEHENNS SPTYLTYSNS LESLAAQDVS 420 SILQDFEPDA QDGGKNCDVQ NIGMHYGVDG NMVRIPLRSI APENVGCNSF EPLLYQGFNG 480 DFETLSPISQ PWPLQSYEGV SPAPASGMVQ RKMCSFGING DYGDYVDYVM PSDPNNLAAL 540 VTNTFNVYHK KGTQDVQNYP LPSFPSAPRM SGLQSLPQNT STNPVGECNG NGKPRMRARR 600 GQATDPHSIA ERLRREKISD RMKNLQELVP KSNRTDKASM LDEIIEYVRF LQLQLKELSM 660 SKVGAAGAVI PLTTDSQAKV GNGLPQLPSI GQAADVSFDE IALEQLVRLM ESDADKALQH 720 LQSEGFCLVP VALADAISAA KESSSSRPSA PVPDDWKKKE TSFADIGVVQ NNSRSSSNSS 780 SSPDRIKRER RVAVEAERKA LLGLRIELLE FLVISQNLSL QKHLNLGTLA KWGFKFAASN 840 YWFWRSEPPN VSRDFWMPDQ SCRVCYDCDS QFTIFNRRHH CRLCGRVFCA KCTANSIPAA 900 SDEPRAGRED WERIRVCYYC FKQWEQGVVA PNNGAGPAAS PGLSPSPSAT SLASTKSSCT 960 CHSSSSTIGS TPYSTGPYQH VPYSSGRSPS QSSSQIDSVP VQQDNVTSQT SISSDVAMAE 1020 PSLNQYGFCV NRSDDEDDDY GVYRLDSEPS HLSHGNDYYG AVTIEEFASV YGPQNVHLDG 1080 DNTSSLLPGS FDTQDAVGIH KIEEEPYEHD NGDQCGTSPY DLQSTNTEPV DFENNGLLWL 1140 PPEPEDEEDE REAVLFDDDD YDGGGSGGGA GEWGYLGSSN SFGNGECRTR EKSIEEHRKA 1200 MKNVVEGHFR ALVSQLLQVE NLPLGDEGNN ESWLDIITSL SWEAATLLKP DTSKGGGMDP 1260 GGYVKVKCIA CGRRTDSTVV KGVVCKKNVA HRRMTSKIEK PRFLILGGAL EYQRVSNLLS 1320 SFDTLLQQEM DHLKMAVAKI DSHHPNVLLV EKSVSRYAQD YLLAKDISLV LNIKRPLLER 1380 IARCTGAQIV PSIDHLTSPK LGFCDMFHVE KFLEVHGSAG QGGKKLTKTL MFFEGCPKPL 1440 GVTVLLYGAN GDELKKVKHV VQYGVFAAYH LALETSFLAD EGASLPELTL KSEITVALPD 1500 KPSSIDRSIS TIPGFSVPPA GKPQGPDASR ELQKSNQGLI SDNNSSTTSG PILNMQGADS 1560 ICSSKACSQA FLIEHALSSR ESRSPFTSLS PPEEDITECY RKELPSICAS ENKIDAGSKD 1620 SCLDNPAQAG EALLNSSLIS NSLATSESLG HGGGALAANH GETPELTSIK HHSDYQNEEV 1680 GSSKEEFPPS PSDHQSILVS LSTRCVWKGT VCERSHLFRI KYYGSFDKPL GRFLRDHLFD 1740 QNYLCRSCGM PSEAHVHCYT HRQGSLTISV KKLPEILLPG EREGKIWMWH RCLKCPRANG 1800 FPPATRRVVM SDAAWGLSFG KFLELSFSNH AAANRVATCG HSLHRDCLRF YGFGRMVACF 1860 RYASIHVHSV YLPPQKLEFN YDNQEWIQKE VEEVGHRAEL LFTELHNALN QILETRPISG 1920 TPDGGKKAPE SSHQIVELEE MLQKEREDFE ESLQKAMHRE VKCGQPAVDI LEINRLRRQL 1980 LFHSYIWDQR LIQAASLSKN SFQEGLRSSL PKLKEKPISS MEKLVETNIN SKAGKGFSSC 2040 DSSLRETKPD VSIYQGGDVG GFSQPEGEQK NNEIVQNPNH SNEAKISTRS SENAMDKSDP 2100 LESGLSVRRA LSEGNESLVV ANLSDTLDAA WTGESHPTSM IPKENGYSKP DSTLVNSPTV 2160 MRKVASNSDL QNCAVDQAGV QTTASTHSLS STSSLKVFDK SYSLNAQKIN IGEYNPVNVP 2220 MFRESERQSG ARLLLPIGIN DTVIPVFDDE PTSVIAYALV SPDYHVQISE SERPRDAMDG 2280 SVSVPLFDSA NLLSLSSFDE SFSETYRNIG SSDESMSSVS RSRSSQALDS LLSKDIHARV 2340 SFTDDGPLGK VKYTVTCYYA TRFEALRRTC CPSERDFVRS LSRCKKWGAQ GGKSNVFFAK 2400 TLDDRFIIKQ VTKTELESFI KFAPSYFKYL SESISTRSPT CLAKILGIYQ VSSKHGKAGK 2460 ESKMDVLVME NLLFRRNVTR LYDLKGSSRS RYNPDTSGSN KVLLDQNLIE AMPTSPIFVG 2520 SKAKRRLERA VWNDTAFLAS IDVMDYSLLV GVDEEKDELV VGIIDFMRQY TWDKHLETWV 2580 KTSGILGGPK NTSPTVISPQ QYKKRFRKAM TTYFLMVPDQ WSPLMIVPSG SQSDLGEETA 2640 QDPS

Sequence ? help Back to Top

Protein Sequence Length: 2644 aa Download sequence

MRRRKEAKME NPLSSHSHSR INFIDIEDDT FRFTPTSRNP SINPINVDDE DQDLRSITAS  60
LLKSVPTPAE ADNFIDLSEE TLDFYDGDDE LRILRFKPSK TPFGKRGKGL FSDFSATESG  120
QSSNSKGDPD FVCEICVEPK SGIESFRIEN CSHGYCTECM AKYVASKLQE NITSIRCPVP  180
DCIGLLEPEY CRPILPPEVF DQWGTALCEA VILGSEKFYC PYKDCSAMLI DDGKEVVRQS  240
ACPNCWRMFC AQCKAPWHEG IECEEFLKLN KDEREREDIM LKNLAQKQQW RRCPKCRFYV  300
EKSMGCMFMM CRCRTAFCYR CGDVLENIHN HYCPSCGGVS NGFHPLPVTL SSHTKSEISS  360
SSWSDVDAKE IPSWACCESE QPNEALLGSV VVVDEHENNS SPTYLTYSNS LESLAAQDVS  420
SILQDFEPDA QDGGKNCDVQ NIGMHYGVDG NMVRIPLRSI APENVGCNSF EPLLYQGFNG  480
DFETLSPISQ PWPLQSYEGV SPAPASGMVQ RKMCSFGING DYGDYVDYVM PSDPNNLAAL  540
VTNTFNVYHK KGTQDVQNYP LPSFPSAPRM SGLQSLPQNT STNPVGECNG NGKPRMRARR  600
GQATDPHSIA ERLRREKISD RMKNLQELVP KSNRTDKASM LDEIIEYVRF LQLQLKELSM  660
SKVGAAGAVI PLTTDSQAKV GNGLPQLPSI GQAADVSFDE IALEQLVRLM ESDADKALQH  720
LQSEGFCLVP VALADAISAA KESSSSRPSA PVPDDWKKKE TSFADIGVVQ NNSRSSSNSS  780
SSPDRIKRER RVAVEAERKA LLGLRIELLE FLVISQNLSL QKHLNLGTLA KWGFKFAASN  840
YWFWRSEPPN VSRDFWMPDQ SCRVCYDCDS QFTIFNRRHH CRLCGRVFCA KCTANSIPAA  900
SDEPRAGRED WERIRVCYYC FKQWEQGVVA PNNGAGPAAS PGLSPSPSAT SLASTKSSCT  960
CHSSSSTIGS TPYSTGPYQH VPYSSGRSPS QSSSQIDSVP VQQDNVTSQT SISSDVAMAE  1020
PSLNQYGFCV NRSDDEDDDY GVYRLDSEPS HLSHGNDYYG AVTIEEFASV YGPQNVHLDG  1080
DNTSSLLPGS FDTQDAVGIH KIEEEPYEHD NGDQCGTSPY DLQSTNTEPV DFENNGLLWL  1140
PPEPEDEEDE REAVLFDDDD YDGGGSGGGA GEWGYLGSSN SFGNGECRTR EKSIEEHRKA  1200
MKNVVEGHFR ALVSQLLQVE NLPLGDEGNN ESWLDIITSL SWEAATLLKP DTSKGGGMDP  1260
GGYVKVKCIA CGRRTDSTVV KGVVCKKNVA HRRMTSKIEK PRFLILGGAL EYQRVSNLLS  1320
SFDTLLQQEM DHLKMAVAKI DSHHPNVLLV EKSVSRYAQD YLLAKDISLV LNIKRPLLER  1380
IARCTGAQIV PSIDHLTSPK LGFCDMFHVE KFLEVHGSAG QGGKKLTKTL MFFEGCPKPL  1440
GVTVLLYGAN GDELKKVKHV VQYGVFAAYH LALETSFLAD EGASLPELTL KSEITVALPD  1500
KPSSIDRSIS TIPGFSVPPA GKPQGPDASR ELQKSNQGLI SDNNSSTTSG PILNMQGADS  1560
ICSSKACSQA FLIEHALSSR ESRSPFTSLS PPEEDITECY RKELPSICAS ENKIDAGSKD  1620
SCLDNPAQAG EALLNSSLIS NSLATSESLG HGGGALAANH GETPELTSIK HHSDYQNEEV  1680
GSSKEEFPPS PSDHQSILVS LSTRCVWKGT VCERSHLFRI KYYGSFDKPL GRFLRDHLFD  1740
QNYLCRSCGM PSEAHVHCYT HRQGSLTISV KKLPEILLPG EREGKIWMWH RCLKCPRANG  1800
FPPATRRVVM SDAAWGLSFG KFLELSFSNH AAANRVATCG HSLHRDCLRF YGFGRMVACF  1860
RYASIHVHSV YLPPQKLEFN YDNQEWIQKE VEEVGHRAEL LFTELHNALN QILETRPISG  1920
TPDGGKKAPE SSHQIVELEE MLQKEREDFE ESLQKAMHRE VKCGQPAVDI LEINRLRRQL  1980
LFHSYIWDQR LIQAASLSKN SFQEGLRSSL PKLKEKPISS MEKLVETNIN SKAGKGFSSC  2040
DSSLRETKPD VSIYQGGDVG GFSQPEGEQK NNEIVQNPNH SNEAKISTRS SENAMDKSDP  2100
LESGLSVRRA LSEGNESLVV ANLSDTLDAA WTGESHPTSM IPKENGYSKP DSTLVNSPTV  2160
MRKVASNSDL QNCAVDQAGV QTTASTHSLS STSSLKVFDK SYSLNAQKIN IGEYNPVNVP  2220
MFRESERQSG ARLLLPIGIN DTVIPVFDDE PTSVIAYALV SPDYHVQISE SERPRDAMDG  2280
SVSVPLFDSA NLLSLSSFDE SFSETYRNIG SSDESMSSVS RSRSSQALDS LLSKDIHARV  2340
SFTDDGPLGK VKYTVTCYYA TRFEALRRTC CPSERDFVRS LSRCKKWGAQ GGKSNVFFAK  2400
TLDDRFIIKQ VTKTELESFI KFAPSYFKYL SESISTRSPT CLAKILGIYQ VSSKHGKAGK  2460
ESKMDVLVME NLLFRRNVTR LYDLKGSSRS RYNPDTSGSN KVLLDQNLIE AMPTSPIFVG  2520
SKAKRRLERA VWNDTAFLAS IDVMDYSLLV GVDEEKDELV VGIIDFMRQY TWDKHLETWV  2580
KTSGILGGPK NTSPTVISPQ QYKKRFRKAM TTYFLMVPDQ WSPLMIVPSG SQSDLGEETA  2640
QDPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	2e-45	bHLH family protein