PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP017651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 244aa MW: 27898.8 Da PI: 8.468 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 92.9 | 5.2e-29 | 6 | 84 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrl 128 a++kewyfF+kr +ky+++ r+nr+t sg+Wkatg dk+++s++ge glkktLv+y+g+a kg+ktdW+mhe+rl PCP017651.1 6 AGDKEWYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDKPIHSHGGEShacSGLKKTLVYYRGSAGKGSKTDWMMHEFRL 84 4789**************************************955444559**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MCAETAGDKE WYFFCKRGRK YKNSIRPNRV TGSGFWKATG IDKPIHSHGG ESHACSGLKK 60 TLVYYRGSAG KGSKTDWMMH EFRLPNSSSS NEHNNRSSNP KNMNTDPQQE AEIWTLCRIF 120 KRNVSYRKYT PDWRDLSADK RHPTDTVNSK KFVTDRQDLL DQSNTYISFG ASDSCYEGKP 180 LVNHTNNINS IINGSHQLHA HAVGQLSSNI QQPNSTHPYM DTFSNISFQD LENDLLNENW 240 DELI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12910.1 | 7e-60 | NAC family protein |