PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP017458.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | AP2 | ||||||||
Protein Properties | Length: 252aa MW: 28127.4 Da PI: 9.8928 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55 | 2e-17 | 136 | 185 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PCP017458.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MLDLNLGFVS RDDVSMSQNK LLTTSPVECS GSFNSSSNLT VTGDDDDDST TLNFLAPNDD 60 VSANHQSGRR TIQLFPLAQS VSSSSSSSAA SKKQWLGLSS GSRLELEPIY YAPAEPRIVL 120 PQQVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA 180 IKFRGIEADI NFSVGDYEDD IKQMSNFTKE EFVHILRRQS TGFSRGSSKF RGVTLHKCGR 240 WEARMGQFLG KK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 8e-68 | AP2 family protein |