PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP017029.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 443aa MW: 50264.4 Da PI: 9.8036

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP017029.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.1	3.5e-07	130	171	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eE ++l ++++q+ + + Ia ++ Rt +++k+r++k PCP017029.1 130 WTKEETDQLFELCQQFDLR-FIVIADRFSSSRTVEELKERYYK 171 *****************.*****9**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MDAKDILGLP KSTHPASQEK KSRPLKESQR KPDGISREVY ALTGGVPPLM PAVEPLQLKK 60 RPPTDEKITW QWLPFTSSAR KDNLQLYHWV KVVNGIPPTG DYSFAKYNKS VDVVKYTDEE 120 YEKHLTDDMW TKEETDQLFE LCQQFDLRFI VIADRFSSSR TVEELKERYY KVSRSILIAR 180 AAALPGDVSE HPIVKEPYKF TQERDRKRAL FMVLSQTKHQ ERKDYEVLAE AKRIAESHMA 240 ARNAKESESL VTFTMDSERA IVFGETLSPP SNSEFAPAMV AHSTSMAENA STLVSLRMLR 300 VYLRTYALDQ MIQAASSSAG LRTIKRVEQS LQELGVNLKP RVPTKAVCAQ HLDLRKEILM 360 LLNLQKQLQH KEAEGSSYRD GPYETPGTPK DRTFVPDSTS FGGEVLGDRV GKRDQKRKAL 420 GRAEAPSLPA QSKRPRKLRA SDL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MDAKDILGLP KSTHPASQEK KSRPLKESQR KPDGISREVY ALTGGVPPLM PAVEPLQLKK  60
RPPTDEKITW QWLPFTSSAR KDNLQLYHWV KVVNGIPPTG DYSFAKYNKS VDVVKYTDEE  120
YEKHLTDDMW TKEETDQLFE LCQQFDLRFI VIADRFSSSR TVEELKERYY KVSRSILIAR  180
AAALPGDVSE HPIVKEPYKF TQERDRKRAL FMVLSQTKHQ ERKDYEVLAE AKRIAESHMA  240
ARNAKESESL VTFTMDSERA IVFGETLSPP SNSEFAPAMV AHSTSMAENA STLVSLRMLR  300
VYLRTYALDQ MIQAASSSAG LRTIKRVEQS LQELGVNLKP RVPTKAVCAQ HLDLRKEILM  360
LLNLQKQLQH KEAEGSSYRD GPYETPGTPK DRTFVPDSTS FGGEVLGDRV GKRDQKRKAL  420
GRAEAPSLPA QSKRPRKLRA SDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein