PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 149aa MW: 16640.7 Da PI: 8.5009 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 153.1 | 5.3e-48 | 10 | 105 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqd +lPianv+rimk++lP +akis++ak+t+qec++ef+sfvt+easdkc++e+rkt+ngdd++wal+ lGf++++++ + yl+kyre+e++k PCP016853.1 10 QEQDGMLPIANVGRIMKQILPPRAKISREAKQTMQECATEFLSFVTGEASDKCHKENRKTVNGDDICWALSALGFDNHAQATTRYLHKYREAERDK 105 69********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MDRSINMVDQ EQDGMLPIAN VGRIMKQILP PRAKISREAK QTMQECATEF LSFVTGEASD 60 KCHKENRKTV NGDDICWALS ALGFDNHAQA TTRYLHKYRE AERDKAAANN QNTAHIKSHG 120 GLQVAQQNQT SNLEFRVLGK GDNSLVTKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09030.1 | 2e-54 | NF-YB family protein |