PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016850.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 1306aa MW: 145150 Da PI: 9.6075

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016850.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.7e-07	191	227	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W+ E ++++da +++G++ W+++a+ + +R+ +++ PCP016850.1 191 QWSRGELQRFYDAYRKYGKD-WRKVAAAVR-NRSIEMVE 227 6***************99.*****.*98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1306 aa Download sequence
MLASLDETAL AISLHKYSMS SSNLSLVIFF VRARPALFLA FVIAFLGGLF IDPTLMILTA 60 SKLCCHFHRH HAANGRALDG LRTRLRDQVT RSSFDLGFDF VFDVNLIENE PGIVFSVWVL 120 QLCLEFSAHV DKKNLKFDAT SYANLAMAPT RKAKGVKRYA TVNEASQEKY GGGSNKKKQR 180 KRKLSDKLGP QWSRGELQRF YDAYRKYGKD WRKVAAAVRN RSIEMVEALY NMNRAYLSLP 240 EGTASVVGLK AMMTDHYNVM EGSDSERESN DALGFSQKLQ KHKLGKDQPS VSKDVFHTHP 300 SASLEGCLSL VKRRKLDGDQ PRAVGKRTPR VPVSYLHKKD DKEAYVSPIK KGRKSEGDND 360 DDVSHVVALL TEASQRGGSP QVSQTPYRRP VHLKSSSVQS SERMHPPPGK AHANLRRASM 420 DGDWLEGSIG SGGAETGDYH RDLLEGVGTV DMPSKGKKFY KKKGKVKHSE NHQFDDGGEA 480 CSGTEEVPNL SSRAADDIEV SNTKGERLSP QGQRTKSKKL YFGDKSSCLD ALQTLADLSL 540 MMPESMESGS SVPLKDGGAN VDAEDKFSVP ETTSTSQFRN KNKLPGAKHR VPCAISGVEG 600 TNSKKSKVGR DPAIDINTVS ESEQQSQSTT KILKRKRKSL MPKISNADAH MDSDMNEPLK 660 TEGFGEEENK PVTKGKRTSQ VSTPSKQWKS ARSLEGSLNG DHRRALADLT GSTAQVPTSS 720 QFNLPMKRTS RRKMYIPRTL HPKEKSCEKK LKNQLNTRSN SVQDRALHLK EKISCCLSSD 780 LLRRWCTFEW FYSALDYAWF AKREFEEYLN HVGLGHIPRL TRVEWGVIRS SLGKPRRFSE 840 HFLHEEREKL KQYRESVRKH YAELRTGVRE GLPTDLARPL SVGQRVIALH PKTREVHDGS 900 VLTVDHDKCR VQFDRPDIGV EFVMDVDCMP LNPLDNMPEA LRGRNIAFDK FSCTSKEPNK 960 NGNLNFGGPM MFASSGHLVK ATSPMDAFIK EEKGNAIYTT AQPKAASADI GRAQQTSYSQ 1020 PGMVVAHNQA READIRALSE LNRALDKKEA LLMELRNTNN NILENQNSGE CTLKDSEPFK 1080 KHYAMVSSAL VNLRQRNTYP ANSLPPWMKQ PANSTIYGDP SSFDSSISQE SGSSVADIVE 1140 VSKSKAHMMV NAAIQVMASG KCGEDAYVGI REALDSIDNE HFISESRLPV NRSQEQVNGS 1200 LGQRNQISSS TSDPNLTSDS SAPKLHTDAD KNEAQILSEV ISACVMAVHM IQTCTERQFP 1260 PAAVAQVLDY AVTSLHPRCP QNVGIYREIQ MCMGRIKTQI LALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1306 aa Download sequence

MLASLDETAL AISLHKYSMS SSNLSLVIFF VRARPALFLA FVIAFLGGLF IDPTLMILTA  60
SKLCCHFHRH HAANGRALDG LRTRLRDQVT RSSFDLGFDF VFDVNLIENE PGIVFSVWVL  120
QLCLEFSAHV DKKNLKFDAT SYANLAMAPT RKAKGVKRYA TVNEASQEKY GGGSNKKKQR  180
KRKLSDKLGP QWSRGELQRF YDAYRKYGKD WRKVAAAVRN RSIEMVEALY NMNRAYLSLP  240
EGTASVVGLK AMMTDHYNVM EGSDSERESN DALGFSQKLQ KHKLGKDQPS VSKDVFHTHP  300
SASLEGCLSL VKRRKLDGDQ PRAVGKRTPR VPVSYLHKKD DKEAYVSPIK KGRKSEGDND  360
DDVSHVVALL TEASQRGGSP QVSQTPYRRP VHLKSSSVQS SERMHPPPGK AHANLRRASM  420
DGDWLEGSIG SGGAETGDYH RDLLEGVGTV DMPSKGKKFY KKKGKVKHSE NHQFDDGGEA  480
CSGTEEVPNL SSRAADDIEV SNTKGERLSP QGQRTKSKKL YFGDKSSCLD ALQTLADLSL  540
MMPESMESGS SVPLKDGGAN VDAEDKFSVP ETTSTSQFRN KNKLPGAKHR VPCAISGVEG  600
TNSKKSKVGR DPAIDINTVS ESEQQSQSTT KILKRKRKSL MPKISNADAH MDSDMNEPLK  660
TEGFGEEENK PVTKGKRTSQ VSTPSKQWKS ARSLEGSLNG DHRRALADLT GSTAQVPTSS  720
QFNLPMKRTS RRKMYIPRTL HPKEKSCEKK LKNQLNTRSN SVQDRALHLK EKISCCLSSD  780
LLRRWCTFEW FYSALDYAWF AKREFEEYLN HVGLGHIPRL TRVEWGVIRS SLGKPRRFSE  840
HFLHEEREKL KQYRESVRKH YAELRTGVRE GLPTDLARPL SVGQRVIALH PKTREVHDGS  900
VLTVDHDKCR VQFDRPDIGV EFVMDVDCMP LNPLDNMPEA LRGRNIAFDK FSCTSKEPNK  960
NGNLNFGGPM MFASSGHLVK ATSPMDAFIK EEKGNAIYTT AQPKAASADI GRAQQTSYSQ  1020
PGMVVAHNQA READIRALSE LNRALDKKEA LLMELRNTNN NILENQNSGE CTLKDSEPFK  1080
KHYAMVSSAL VNLRQRNTYP ANSLPPWMKQ PANSTIYGDP SSFDSSISQE SGSSVADIVE  1140
VSKSKAHMMV NAAIQVMASG KCGEDAYVGI REALDSIDNE HFISESRLPV NRSQEQVNGS  1200
LGQRNQISSS TSDPNLTSDS SAPKLHTDAD KNEAQILSEV ISACVMAVHM IQTCTERQFP  1260
PAAVAQVLDY AVTSLHPRCP QNVGIYREIQ MCMGRIKTQI LALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	184	KKKQRKRKL
2	177	185	KKKQRKRKL
3	312	354	KRRKLDGDQPRAVGKRTPRVPVSYLHKKDDKEAYVSPIKKGRK
4	731	752	RRKMYIPRTLHPKEKSCEKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein