PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016138.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 201aa MW: 22657.9 Da PI: 10.1722 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.8 | 2.1e-06 | 88 | 110 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H PCP016138.1 88 FVCEICNKGFQREQNLQLHRRGH 110 89*******************88 PP | |||||||
2 | zf-C2H2 | 14.1 | 0.00014 | 164 | 186 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +++ PCP016138.1 164 WKCEKCSKRYAVQSDWKAHSKVC 186 58*****************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MMNKGLMVDE NMSNLTCASG DLSASNSSIR NESSSAGTVY PHPPSSAQIQ QQQAPPPPKK 60 KRNLPGNPDP DAEVIALSPK SLMATNRFVC EICNKGFQRE QNLQLHRRGH NLPWKLKQRT 120 GKEVRKKVYL CPEPTCVHHD PSRALGDLTG IKKHFSRKHG EKKWKCEKCS KRYAVQSDWK 180 AHSKVCGTRE YRCDCGTLFS R |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 127 | KLKQRTGKEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02080.1 | 2e-97 | C2H2 family protein |