PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015741.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

SBP

Protein Properties

Length: 1320aa MW: 148184 Da PI: 6.7103

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015741.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.8	4.7e-41	132	209	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++lv +++qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++ PCP015741.1 132 VCQVEDCKADLSSAKDYHRRHKVCDMHSKATKALVGNVMQRFCQQCSRFHALQEFDEGKRSCRRRLAGHNRRRRKTNP 209 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1320 aa Download sequence
MVPDLTGVGK RSMEWDLNGW KWDGDLFTAS PLNSTPSDGR SRQFFPVRPE TLFDAGLSNS 60 SSGSDNIGPG NEKGTRELEK RRRDVFVENG ELNDEAASLN LKLGGQTYPV MEEEVQTGKK 120 TKIIGTTSNR AVCQVEDCKA DLSSAKDYHR RHKVCDMHSK ATKALVGNVM QRFCQQCSRF 180 HALQEFDEGK RSCRRRLAGH NRRRRKTNPD TAVNGGSLNN ESGSSYLLIS LLRILSNMHS 240 SSSDQTKDQD VVSNLLRSLA NVAGMADGRN VSKLLQGSQG LFNSGTSVQT ARKVLDMDDG 300 VNPEDPLRPK GHCSILPASR DSSESKSVTP EPTSRRFQLN DIDLNSTYDD SQDFVENLGN 360 THVPASPGTA SPGFPSWMQR DSHKSSPPQT SGNSDLTSTQ SPSSSSGEAQ SRTDRIVFKL 420 FGKDPSELPF ALRSQILDWL SHSPTNIESY IRPGCIILTI YLRLEKSTWE EFCCHLGSSL 480 KTLLDAADDP FWRTGWVYTR VQHFVAFTYN GEVVLDTPLP LKTDKSCRIS CIKPIAISLS 540 ERAEFVVKGL NLSRSTTRLL CALEGKYLVQ ETCYDLMDDA DSSVEDDEQK CLRFSCSIPN 600 ITGRGFIEVE DHGLSSSFFP FIVAEQEVCS EICMLEDVIE AAETDDDIQS GPEKVEAKNQ 660 ALDFIHELGW LLHRSRVKFR LGQLDPNLDL FPFGRFRLLM EFSIDHDWCA VVKKLLGILF 720 DGTVDAGKHP SVESALLDMG LLHRAVRRNG RHMKPQYPNF KLLLRAFTTP AVSRRSTSSP 780 SSDTRKRHWK KGEYPGVSET STSANYRKPP GRSTSSPSSD TRKKHWKRGE FPGVSETSTP 840 ATYRKPPARS TSYPSSETKK KHWKQGEFPG VSETSIPAVY RKPPLKNVKK KLDRKNNAKA 900 WVNTVTEALS DAIDKKQWLQ ALEVFDMLRE QPFYQPKEGT YMKLIGLLGR CSQPNRARQL 960 FDTMVEEGCE PTLELYTALL TAYCRNNLID EAFSVLNLMK TLPQCQPDVF TYSTLIKVCI 1020 DHLKFDLVES LYEEMAERLI IPNTVTQNIV LSGYGKAGKY DQMEKVLSGM LEGTSCKPDV 1080 WTMNVILSVF GNKGQIDMME RWYEKFRDFG IEPETRTFNI LIGAYGKKRL YDKMSTVMEY 1140 MRKLQFPWTT ATYNNVIEAF ADVGDAKNME YTFEQMRAEG MKADTKTFCC LINGYAKAGL 1200 FHKVVSSIQL AGKFEIPENT TFYNAVIAAC AKAEDLMEME RVFNRMKDKQ CQPDSTTYSL 1260 MVEAYSKEGM NDKIYYLEQE IGADGNQIDQ ISAEGNQNDQ ISVEDNQSDQ ASGAESGIVV

Sequence ? help Back to Top

Protein Sequence Length: 1320 aa Download sequence

MVPDLTGVGK RSMEWDLNGW KWDGDLFTAS PLNSTPSDGR SRQFFPVRPE TLFDAGLSNS  60
SSGSDNIGPG NEKGTRELEK RRRDVFVENG ELNDEAASLN LKLGGQTYPV MEEEVQTGKK  120
TKIIGTTSNR AVCQVEDCKA DLSSAKDYHR RHKVCDMHSK ATKALVGNVM QRFCQQCSRF  180
HALQEFDEGK RSCRRRLAGH NRRRRKTNPD TAVNGGSLNN ESGSSYLLIS LLRILSNMHS  240
SSSDQTKDQD VVSNLLRSLA NVAGMADGRN VSKLLQGSQG LFNSGTSVQT ARKVLDMDDG  300
VNPEDPLRPK GHCSILPASR DSSESKSVTP EPTSRRFQLN DIDLNSTYDD SQDFVENLGN  360
THVPASPGTA SPGFPSWMQR DSHKSSPPQT SGNSDLTSTQ SPSSSSGEAQ SRTDRIVFKL  420
FGKDPSELPF ALRSQILDWL SHSPTNIESY IRPGCIILTI YLRLEKSTWE EFCCHLGSSL  480
KTLLDAADDP FWRTGWVYTR VQHFVAFTYN GEVVLDTPLP LKTDKSCRIS CIKPIAISLS  540
ERAEFVVKGL NLSRSTTRLL CALEGKYLVQ ETCYDLMDDA DSSVEDDEQK CLRFSCSIPN  600
ITGRGFIEVE DHGLSSSFFP FIVAEQEVCS EICMLEDVIE AAETDDDIQS GPEKVEAKNQ  660
ALDFIHELGW LLHRSRVKFR LGQLDPNLDL FPFGRFRLLM EFSIDHDWCA VVKKLLGILF  720
DGTVDAGKHP SVESALLDMG LLHRAVRRNG RHMKPQYPNF KLLLRAFTTP AVSRRSTSSP  780
SSDTRKRHWK KGEYPGVSET STSANYRKPP GRSTSSPSSD TRKKHWKRGE FPGVSETSTP  840
ATYRKPPARS TSYPSSETKK KHWKQGEFPG VSETSIPAVY RKPPLKNVKK KLDRKNNAKA  900
WVNTVTEALS DAIDKKQWLQ ALEVFDMLRE QPFYQPKEGT YMKLIGLLGR CSQPNRARQL  960
FDTMVEEGCE PTLELYTALL TAYCRNNLID EAFSVLNLMK TLPQCQPDVF TYSTLIKVCI  1020
DHLKFDLVES LYEEMAERLI IPNTVTQNIV LSGYGKAGKY DQMEKVLSGM LEGTSCKPDV  1080
WTMNVILSVF GNKGQIDMME RWYEKFRDFG IEPETRTFNI LIGAYGKKRL YDKMSTVMEY  1140
MRKLQFPWTT ATYNNVIEAF ADVGDAKNME YTFEQMRAEG MKADTKTFCC LINGYAKAGL  1200
FHKVVSSIQL AGKFEIPENT TFYNAVIAAC AKAEDLMEME RVFNRMKDKQ CQPDSTTYSL  1260
MVEAYSKEGM NDKIYYLEQE IGADGNQIDQ ISAEGNQNDQ ISVEDNQSDQ ASGAESGIVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein