PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015723.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 923aa MW: 103230 Da PI: 6.3388

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015723.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	33.7	1e-10	28	148	3	109
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +G F+P+ e ++ +yL +k++g+ +++e+vi+++d+ k P d ++ ++ ae+++ yf+++++ + +++r t++gyWk +++ ++ PCP015723.1 28 RGESFNPNPETILIKYLFNKLAGRATPVEDVIRHIDLQKGMPPDANQippslfCHGAENRSAYFYICAEVVL-GDVKTERPTSNGYWKLLSNEQVHIQ 124 6889*********************************999888645667766666777999998876.57899*********8776543333 PP NAM 95 k..kgel.........vglkktLvfy 109 + + vg +t ++ PCP015723.1 125 TssD--SdddavavvhVGNVRTWRYH 148 2231..12334444446666666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 923 aa Download sequence
MSNTDHSFDI IAASTVTESC TEADLNKRGE SFNPNPETIL IKYLFNKLAG RATPVEDVIR 60 HIDLQKGMPP DANQIPPSLF CHGAENRSAY FYICAEVVLG DVKTERPTSN GYWKLLSNEQ 120 VHIQTSSDSD DDAVAVVHVG NVRTWRYHGR DLRRPMRAVS ETCFKIREYY LNPELEPTTL 180 IVTGLYLGCF FKKLCVCEFI DEDSELRLKQ KCRVATLAIS GGDPLFILPG HLPIGPRLIC 240 ALLDAPEPGG DPLDTLFIRA PPPSPSSPWK EESDDECEKS VNHLHNGEEV CIGTARTFIS 300 FKNIEEEGGY EMVEYKLLNS EALGIDPRLI QSRPFNDLKY VNMAGEGSGF VQASIPKLEG 360 HYDHWAMLME NFLRSKEYWS LVEHGIPAVA EGGSLSEGQR KVFEEHKLKD LKAKNYLFQA 420 IDRAVLETIL NKDTAKEIWD SLKQKYQGTA RVKRAQLQAL RKEFEMLHMK TGETVNEFFG 480 RTLTIANKRR INGDKLTDVE VIEKILRSMT PKYDYVVCSI EESKDLDILS IDELQSSLLV 540 HEQRMIGHVV EEQALKVVHE ENYGGRGRGR GSYRGRGRGR GRQMFDKSTI ECYNCHELGH 600 FQYECPKRDK EGKVNYAEAS EEMLLMAYVD TQEIKEDIWF LDSGCSNHMC GKRALFSDFD 660 GSFRETVKLG NNTSMAVMGK GNIRLQVHGI IQVITGVFYV PALKNNLLSI GQLQERGLAI 720 LIKQGRCKIY HPERGLIIET VMAANRMFIL VAQHQFNEQA CFTAITDDLV QLWHCRYGHL 780 SLGGLKTLQQ KQMVSGLPEI RDSSRVCENC LIGKQSRDPF PKHKIFFSIY LGLTTITCHD 840 GNLEKIKKGI VAPALLTGGG HQIILPPDAD IGAKGSIAPL IDYISGNPDS PAPSSAPQLG 900 LFGLETDSIL ALTTGAAGEA STS

Sequence ? help Back to Top

Protein Sequence Length: 923 aa Download sequence

MSNTDHSFDI IAASTVTESC TEADLNKRGE SFNPNPETIL IKYLFNKLAG RATPVEDVIR  60
HIDLQKGMPP DANQIPPSLF CHGAENRSAY FYICAEVVLG DVKTERPTSN GYWKLLSNEQ  120
VHIQTSSDSD DDAVAVVHVG NVRTWRYHGR DLRRPMRAVS ETCFKIREYY LNPELEPTTL  180
IVTGLYLGCF FKKLCVCEFI DEDSELRLKQ KCRVATLAIS GGDPLFILPG HLPIGPRLIC  240
ALLDAPEPGG DPLDTLFIRA PPPSPSSPWK EESDDECEKS VNHLHNGEEV CIGTARTFIS  300
FKNIEEEGGY EMVEYKLLNS EALGIDPRLI QSRPFNDLKY VNMAGEGSGF VQASIPKLEG  360
HYDHWAMLME NFLRSKEYWS LVEHGIPAVA EGGSLSEGQR KVFEEHKLKD LKAKNYLFQA  420
IDRAVLETIL NKDTAKEIWD SLKQKYQGTA RVKRAQLQAL RKEFEMLHMK TGETVNEFFG  480
RTLTIANKRR INGDKLTDVE VIEKILRSMT PKYDYVVCSI EESKDLDILS IDELQSSLLV  540
HEQRMIGHVV EEQALKVVHE ENYGGRGRGR GSYRGRGRGR GRQMFDKSTI ECYNCHELGH  600
FQYECPKRDK EGKVNYAEAS EEMLLMAYVD TQEIKEDIWF LDSGCSNHMC GKRALFSDFD  660
GSFRETVKLG NNTSMAVMGK GNIRLQVHGI IQVITGVFYV PALKNNLLSI GQLQERGLAI  720
LIKQGRCKIY HPERGLIIET VMAANRMFIL VAQHQFNEQA CFTAITDDLV QLWHCRYGHL  780
SLGGLKTLQQ KQMVSGLPEI RDSSRVCENC LIGKQSRDPF PKHKIFFSIY LGLTTITCHD  840
GNLEKIKKGI VAPALLTGGG HQIILPPDAD IGAKGSIAPL IDYISGNPDS PAPSSAPQLG  900
LFGLETDSIL ALTTGAAGEA STS