PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015701.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 443aa    MW: 50678.9 Da    PI: 7.5082
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015701.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B394.67e-30123227199
                  EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 
                  f kv tpsdv+k++rlv+pk++ae++    ++++ ++  l ++d+ g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  + +l
  PCP015701.1 123 FAKVVTPSDVGKLNRLVIPKQHAERYfpldSSSNDKGLFLNFQDRMGKPWRFRYSYWNSSQSYVITKGWSRFVKEKKLDAGDIVSFERGvGEsGKDRL 220
                  89***************************9445557789************************************************66577788899 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  ++ ++r+
  PCP015701.1 221 FIDWRRR 227
                  9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    
MEFMQRDQKG YSDKEDQDQD LEQEDQEEEE DIITTSKFSS SSSHTSTNSN YGSSPKYKAI  60
LFPPPPDHQQ QYGQQKPRLN IQNHGSPEAI SFMDLSLNKD IQAAEGGTDE NYWPASCETE  120
HLFAKVVTPS DVGKLNRLVI PKQHAERYFP LDSSSNDKGL FLNFQDRMGK PWRFRYSYWN  180
SSQSYVITKG WSRFVKEKKL DAGDIVSFER GVGESGKDRL FIDWRRRPPP PPPPQLHHHN  240
HYAGGRFYSL LQRPLPSSVI SSMPLRHHEH FLHSNNNVHH PYHHHHHDHQ IMNQQYLPHQ  300
IHQLQGGRGH HVIHHQYPRV IDSVPLYQHG NYRSSTTSTS SESASVASAG KKLRLFGVNM  360
ECSSSPTEKE DHQECQILSS TAIPYHHHHH HHNLPSSTSS LASAPLQFMR LPNTSSSSTP  420
PDHHFLSNKG KSTTTSSSFY LNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.17e-67B3 family protein