PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015593.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 316aa    MW: 35919.2 Da    PI: 5.158
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015593.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.4e-30130187258
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                  +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eHnh
  PCP015593.1 130 SDVWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSCSNPETFIITYTAEHNH 187
                  79*************************998**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MENWDLQAVV RGCNSNIDEV IEDSQIPYFC APLSFQEDNE LFAAKFPQAF EATTTLDELE  60
ELYKPFYPVF QLTTPPTILT SSISVPQEII TQAPKLIKNM EESTPLRKRI SRKNQNKRVV  120
KEVKAEDLFS DVWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CSARKQVERS CSNPETFIIT  180
YTAEHNHVHP TRRNSLAGST RSKFLSSKNK DKCGSSSNSP ATPTIAASIE DDREFVENVS  240
INAVKVEAKL SEQDEISKEI FLLDNTVNDE NFPSFEDLDR KLEPVMDGWF SDEFSDNFPS  300
PWFNIKGHSH TVTGAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.14e-38WRKY family protein