PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015428.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NZZ/SPL
Protein Properties Length: 371aa    MW: 39893.6 Da    PI: 8.3567
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015428.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE22.51.9e-07175180
       NOZZLE  1 matslffmstdqnsvrnpnellrntrlvvnssgeirte.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkk 80
                 mat +++m++++n+ ++p + l  ++       e ++e +k ++  k  s  a  + kk   rg+gva+ler ++++ kk 
  PCP015428.1  1 MATPMLLMASERNTTKQPAKTLFGSYD------ESKSEpAKPTKTTKKSSTKASSNTKKQPQRGLGVAQLERLRLQDWKKM 75
                 89****************998877665......55555233345555555556666666667*************999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MATPMLLMAS ERNTTKQPAK TLFGSYDESK SEPAKPTKTT KKSSTKASSN TKKQPQRGLG  60
VAQLERLRLQ DWKKMTEVPQ LQPQPQVLNL PPLPHHHHHQ YQNPIILPDP LNSVPVQYGA  120
SRFNGPSVMN GCGGSAASTT CFYGLVGQRV GNGSGFGYAG GNNLVTNLDP SPYGVGAPDP  180
RVQSGAVCET SRELSSMPKI QSLSSDCCDH CLKGIQKKRF ISGDYMALNG WSDKSATVSP  240
INGSDFLGLN PETGSFGDRV VSRAAGYLGR SNLVDDQGVG VRAVHRKGGS AGGGIFMEYE  300
FFPAADHQKS DEIKRGGTYP KLQTVGREEE EEASDISPAA TFNGYGIGAA DSYHDHQQHH  360
NPVDLSLKLS F