PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015400.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 396aa MW: 44742.6 Da PI: 4.5474

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015400.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	85.5	7.4e-27	15	109	2	75
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT.....................X CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks.....................k 75 Fl+k+y++++d++ ++++swse+g+sfvv+d++efak++Lp yFkh+nf+SFvRQLn+Y+ + ++ + +++++ + PCP015400.1 15 FLTKTYDLVDDPSSNHMVSWSETGSSFVVWDPTEFAKEMLPMYFKHNNFSSFVRQLNTYNHEYSSVPLTDTEReeyekkinrlnhdksllelevQ 109 9***********************************************************99888877764444454444444444433333320 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MDGSQGGSGG APAPFLTKTY DLVDDPSSNH MVSWSETGSS FVVWDPTEFA KEMLPMYFKH 60 NNFSSFVRQL NTYNHEYSSV PLTDTEREEY EKKINRLNHD KSLLELEVQR HQRENQEFEF 120 QIQILREQLQ NMENRQRQYT AFLAQLVQKP GFASVLVQQS EIHSKKRRLL KSNDFPDDFG 180 MEDLTLNPQK ETLGIKLDQL EKMESSLNFW EDFLHGVGEA MPEELNDIGP LSQASPIIVT 240 EIQDTSMNSR PCSPRSHISS PNSMNAHSFP EVAGSANPFD ILTITSMCHT VDFRSKSSGI 300 DMNSKPDSAP ALDSSKENVV EVKNAEPAKA NDVFWEQCLT ETPGLDDAPE VQSERMDGDG 360 DGKASDANPA IRKKLWWNTD NVDNFRNQIG RLTPAT

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MDGSQGGSGG APAPFLTKTY DLVDDPSSNH MVSWSETGSS FVVWDPTEFA KEMLPMYFKH  60
NNFSSFVRQL NTYNHEYSSV PLTDTEREEY EKKINRLNHD KSLLELEVQR HQRENQEFEF  120
QIQILREQLQ NMENRQRQYT AFLAQLVQKP GFASVLVQQS EIHSKKRRLL KSNDFPDDFG  180
MEDLTLNPQK ETLGIKLDQL EKMESSLNFW EDFLHGVGEA MPEELNDIGP LSQASPIIVT  240
EIQDTSMNSR PCSPRSHISS PNSMNAHSFP EVAGSANPFD ILTITSMCHT VDFRSKSSGI  300
DMNSKPDSAP ALDSSKENVV EVKNAEPAKA NDVFWEQCLT ETPGLDDAPE VQSERMDGDG  360
DGKASDANPA IRKKLWWNTD NVDNFRNQIG RLTPAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	2e-51	HSF family protein