PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015297.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 1199aa MW: 133529 Da PI: 6.4455

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015297.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.1	1.2e-06	200	226	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++iN ++ L+el+P + PCP015297.1 200 SHSLAERARREKINARMKLLQELVPGC 226 8************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1199 aa Download sequence
MDPTGATVPG STLSGPELES LQFREEIHRL MTAPENASSF TALLELAPTQ AMELLHISTE 60 PDSAPPPAAV SGDPQRTPFV QHLPFNSSLT FPTNPAPIER AAKFSTFAGD GSPDTNSALS 120 NYGAELEKVK TEPAETDSNP SSSQLTLDLT KNNQRTSGKR KEREKKIKAP TKKCKTEIKE 180 DAEKLPYVHV RARRGQATDS HSLAERARRE KINARMKLLQ ELVPGCNKFS EVILLFSSEV 240 DYCTQSILDA NFLISGTALV LDEIISHVQS LQRQVEILSM RLAAVNPRID FNFDSLLVAE 300 SGSLMESNFA SMVTPLMCPE VPINRNRQPY QQQWHFEALP QPVWGREEEN HTFISPEPSS 360 SVGILQQTQS QLRTSRFASP REEIDLMAPP PPLLIQSLTL PLLFLLFLLP PLQSHFATSP 420 IIELPNNPTT TISVADYGAV GDGLRYDTIA IQSAIDSCPS PSPCRVTFPA GLTYLTATIR 480 LKSGVVLDIQ EGATLLGGPR LEDYPKEQSK WYVVLAENAI NVGISGGGVV DGQGLKFVTR 540 FDERKNVMVS WNWTGACLGD ECRPRLVGFI NCRNVNLSNL KLRQPAYWCL HIVQCENILI 600 EDVSIYGDFN TPNNDGIDIE DSNNTVITRC HINTGDDAIC PKTYTGPLYN LTVTNCWIRT 660 KSSAIKLGSA SWFDFKGLVF DNITIVDSHR GLGLQIRDGG NVSDITFSNI NIRTRYYDQS 720 WWGRAEPIYV TTCPRHSKSK EGSISNLLFV NITSTSENGV FLSGLEMKFD GYYTLLNECV 780 NRKAFREGQR VHAHMIRTCY LPPVHLGTRL IIFYNYCDCL GDAGRMLDEM PERNVVSWTA 840 MVSAYSKRGY ASEALKLLVQ MLRSGASCID NFAGMEPNEF TFVTIITSCT GASGLDLGRK 900 IHSLIIRRNF EWHIFVGSSL LDMYAKAGRI YEARGVFDCL PERDVVSCTA IISGYAQLGP 960 DEETLELLRQ LQREGMTSNY VTYASVSTAL SGLAELDLGR QVHSHILCRE LPSYVVLLNS 1020 LIDMYSKCGN LSYSRRIFDS MTERTIISWN AMLVGYSKHG MGKEVVKLFK LMKEENKVRP 1080 DSVTFLVVLF GCSHGGMKEG WNSFMRWKKV KMELSQSLNT LGACRVHSNI DIGEFVGFQL 1140 LQIEPENAEG EDTPKPHEKL VLAFGMIATP ERVPVTFRFV LIAITSPNLS RRFKEDKCV

Sequence ? help Back to Top

Protein Sequence Length: 1199 aa Download sequence

MDPTGATVPG STLSGPELES LQFREEIHRL MTAPENASSF TALLELAPTQ AMELLHISTE  60
PDSAPPPAAV SGDPQRTPFV QHLPFNSSLT FPTNPAPIER AAKFSTFAGD GSPDTNSALS  120
NYGAELEKVK TEPAETDSNP SSSQLTLDLT KNNQRTSGKR KEREKKIKAP TKKCKTEIKE  180
DAEKLPYVHV RARRGQATDS HSLAERARRE KINARMKLLQ ELVPGCNKFS EVILLFSSEV  240
DYCTQSILDA NFLISGTALV LDEIISHVQS LQRQVEILSM RLAAVNPRID FNFDSLLVAE  300
SGSLMESNFA SMVTPLMCPE VPINRNRQPY QQQWHFEALP QPVWGREEEN HTFISPEPSS  360
SVGILQQTQS QLRTSRFASP REEIDLMAPP PPLLIQSLTL PLLFLLFLLP PLQSHFATSP  420
IIELPNNPTT TISVADYGAV GDGLRYDTIA IQSAIDSCPS PSPCRVTFPA GLTYLTATIR  480
LKSGVVLDIQ EGATLLGGPR LEDYPKEQSK WYVVLAENAI NVGISGGGVV DGQGLKFVTR  540
FDERKNVMVS WNWTGACLGD ECRPRLVGFI NCRNVNLSNL KLRQPAYWCL HIVQCENILI  600
EDVSIYGDFN TPNNDGIDIE DSNNTVITRC HINTGDDAIC PKTYTGPLYN LTVTNCWIRT  660
KSSAIKLGSA SWFDFKGLVF DNITIVDSHR GLGLQIRDGG NVSDITFSNI NIRTRYYDQS  720
WWGRAEPIYV TTCPRHSKSK EGSISNLLFV NITSTSENGV FLSGLEMKFD GYYTLLNECV  780
NRKAFREGQR VHAHMIRTCY LPPVHLGTRL IIFYNYCDCL GDAGRMLDEM PERNVVSWTA  840
MVSAYSKRGY ASEALKLLVQ MLRSGASCID NFAGMEPNEF TFVTIITSCT GASGLDLGRK  900
IHSLIIRRNF EWHIFVGSSL LDMYAKAGRI YEARGVFDCL PERDVVSCTA IISGYAQLGP  960
DEETLELLRQ LQREGMTSNY VTYASVSTAL SGLAELDLGR QVHSHILCRE LPSYVVLLNS  1020
LIDMYSKCGN LSYSRRIFDS MTERTIISWN AMLVGYSKHG MGKEVVKLFK LMKEENKVRP  1080
DSVTFLVVLF GCSHGGMKEG WNSFMRWKKV KMELSQSLNT LGACRVHSNI DIGEFVGFQL  1140
LQIEPENAEG EDTPKPHEKL VLAFGMIATP ERVPVTFRFV LIAITSPNLS RRFKEDKCV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57800.1	5e-86	bHLH family protein