PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015234.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 851aa MW: 94472.6 Da PI: 4.5577

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015234.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.8	8.4e-53	9	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lp GfrF+Ptdeel+++yL+ k++g++ e+ +vi+e+d++++ePwdLpk +k++++ew+fF++rd+ky++g+r+nrat++gyWkatgkd++++s+ PCP015234.1 9 LPLGFRFRPTDEELINHYLRLKINGRDSEV-RVIPEIDVCRWEPWDLPKlsVIKSDDQEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRTIKSRq 105 699**********************999.99***********5458889999**********************************98 PP NAM 96 ......kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +vg+kktLvfy+grapkge+t+W+mheyr+ PCP015234.1 106 cksasnSNGQVGMKKTLVFYRGRAPKGERTSWIMHEYRA 144 8777766667*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 851 aa Download sequence
MAELSMESLP LGFRFRPTDE ELINHYLRLK INGRDSEVRV IPEIDVCRWE PWDLPKLSVI 60 KSDDQEWFFF CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSRQCKSAS NSNGQVGMKK 120 TLVFYRGRAP KGERTSWIMH EYRATQKELD GTGPGQGAFV LCRLFHKPEE KADVPKYDEV 180 EQTGLSPTPT KSSPDESSDI IQETATSEIQ GENQAEGIMR WLTDNSDNVT PDALPPLPDI 240 FMASDVEDQG AVETGIQGHL TMEENPAFYE SLGGPIDCKV FSPLHLQINA ELEHFMGSPF 300 TSDFGNYDNG LHFQDGTCEL DVSLTELLDE FGNSHYESSC EESTSQKNLV VGNETYLSGN 360 ACTTPPVNSC FNGAWDNTDT NITQHDLQRM ASGLYNEQFG SEDLQNTSFG YWQAEAQASL 420 DDQKPRMGKM VDSYLSECSL AEQFPVSSVN DGLDDSTSWN HGVDHVGGTG IKIRARGPQL 480 QPNTDNFVYQ GTAARRLRLS VDRSSGSITN GNESDENYSR EDDEVQSTIT QPREDIGQSP 540 TSDEQEEEHA IFNDKEELSS RNNSINHGCD PDGRSRIKIR TRQPQQRSNS DSSVTQGTAP 600 RRIRLQMNIS SGSIADSNVR DTDDGGEDEV QSTNTEAREA IQQSLTSDEQ EKGHAEINNE 660 DLATMKDSVS YDSDVVGRTG IKIKAPEPQQ PLSSDDFVTQ GSAPRRIRLQ MKSSPWSVAD 720 SKVRDTTPGE EDNVQSTIHE VKEAREKICN FDGQDAESHL SKSDVNRKII DDSPTKPVDE 780 SSGTGGEAPR KLRLRTARDD ALPSNHIGKS MPSKTMPKGH GLSPTFVVSV GIPLAVTLFV 840 AFSGIWMTFR P

Sequence ? help Back to Top

Protein Sequence Length: 851 aa Download sequence

MAELSMESLP LGFRFRPTDE ELINHYLRLK INGRDSEVRV IPEIDVCRWE PWDLPKLSVI  60
KSDDQEWFFF CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSRQCKSAS NSNGQVGMKK  120
TLVFYRGRAP KGERTSWIMH EYRATQKELD GTGPGQGAFV LCRLFHKPEE KADVPKYDEV  180
EQTGLSPTPT KSSPDESSDI IQETATSEIQ GENQAEGIMR WLTDNSDNVT PDALPPLPDI  240
FMASDVEDQG AVETGIQGHL TMEENPAFYE SLGGPIDCKV FSPLHLQINA ELEHFMGSPF  300
TSDFGNYDNG LHFQDGTCEL DVSLTELLDE FGNSHYESSC EESTSQKNLV VGNETYLSGN  360
ACTTPPVNSC FNGAWDNTDT NITQHDLQRM ASGLYNEQFG SEDLQNTSFG YWQAEAQASL  420
DDQKPRMGKM VDSYLSECSL AEQFPVSSVN DGLDDSTSWN HGVDHVGGTG IKIRARGPQL  480
QPNTDNFVYQ GTAARRLRLS VDRSSGSITN GNESDENYSR EDDEVQSTIT QPREDIGQSP  540
TSDEQEEEHA IFNDKEELSS RNNSINHGCD PDGRSRIKIR TRQPQQRSNS DSSVTQGTAP  600
RRIRLQMNIS SGSIADSNVR DTDDGGEDEV QSTNTEAREA IQQSLTSDEQ EKGHAEINNE  660
DLATMKDSVS YDSDVVGRTG IKIKAPEPQQ PLSSDDFVTQ GSAPRRIRLQ MKSSPWSVAD  720
SKVRDTTPGE EDNVQSTIHE VKEAREKICN FDGQDAESHL SKSDVNRKII DDSPTKPVDE  780
SSGTGGEAPR KLRLRTARDD ALPSNHIGKS MPSKTMPKGH GLSPTFVVSV GIPLAVTLFV  840
AFSGIWMTFR P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	1e-138	NAC family protein