PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015167.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 351aa    MW: 37820.4 Da    PI: 5.9217
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015167.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.12.1e-17254287134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  PCP015167.1 254 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 287
                  99*****************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MMGPSFIDDI DCGSLFDTID DLLNFPTDDV ESALGPAPDC DAALNSSSPW PSQSGSLQPP  60
NEAVFSGNSA SDLSAELDVP IEDIVQLEWL SNFCEDSFSG GSLTINKPDN PFVNNESSHQ  120
QFQTSSPISV LDSSSSCSVE KNVPQSPGQV VPGKRGRARS KRPRPATFNP RPAIQLISPA  180
SSVTEAEALQ HQPLLPLKVH SDSENFAESR PVIKIPKQAS GEQKKKKKIK LTLPQAPAEG  240
NQSSGTTQGA VRKCLHCEIT KTPQWRAGPM GPKTLCNACG VRYKSGRLFP EYRPAASPTF  300
VPALHSNSHK KVLEMRNKGG ELVPFGETTT AMTETPELIP NANHSISLDY M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.26e-57GATA family protein