PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP015167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 351aa MW: 37820.4 Da PI: 5.9217 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.1 | 2.1e-17 | 254 | 287 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C tkTp+WR gp g+ktLCnaCG++y++ + PCP015167.1 254 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 287 99*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MMGPSFIDDI DCGSLFDTID DLLNFPTDDV ESALGPAPDC DAALNSSSPW PSQSGSLQPP 60 NEAVFSGNSA SDLSAELDVP IEDIVQLEWL SNFCEDSFSG GSLTINKPDN PFVNNESSHQ 120 QFQTSSPISV LDSSSSCSVE KNVPQSPGQV VPGKRGRARS KRPRPATFNP RPAIQLISPA 180 SSVTEAEALQ HQPLLPLKVH SDSENFAESR PVIKIPKQAS GEQKKKKKIK LTLPQAPAEG 240 NQSSGTTQGA VRKCLHCEIT KTPQWRAGPM GPKTLCNACG VRYKSGRLFP EYRPAASPTF 300 VPALHSNSHK KVLEMRNKGG ELVPFGETTT AMTETPELIP NANHSISLDY M |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 165 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 6e-57 | GATA family protein |