PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014940.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 368aa MW: 39711.8 Da PI: 8.5068

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014940.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.2	3.6e-38	82	142	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalr vPvGgg+r+nkk++ PCP014940.1 82 PETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKKTK 142 67899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MVFSSIPVYV DPPNWHQQPN YHPLGGTTAG SENPHEFPPL PPPPSLTHVC GAGSISGVGG 60 GPGSIRPSSM SDRARLAKIP QPETALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW 120 TRGGALRSVP VGGGCRRNKK TKSNSSSSSR SKSPVATGDH IQTGSNSITN NSSNHMIGNT 180 PHHLTQLPPS THQSLPFLAS SIPSLGRYGV AGNMGLNFNE IQQEQTDHHH HHMGFQFHQI 240 AGGNNMNNLS GGILGGDHNN QWRNSNLQQI PFLVGTGFES STSTGLYPFQ TGDQGVDHQA 300 TTDPMVGNNS RVNTEQLPPP VKTEDNHGLT FTSTPISAET NNSQFWGGNL NAWTDLSGLN 360 SSSTSHLL

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MVFSSIPVYV DPPNWHQQPN YHPLGGTTAG SENPHEFPPL PPPPSLTHVC GAGSISGVGG  60
GPGSIRPSSM SDRARLAKIP QPETALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW  120
TRGGALRSVP VGGGCRRNKK TKSNSSSSSR SKSPVATGDH IQTGSNSITN NSSNHMIGNT  180
PHHLTQLPPS THQSLPFLAS SIPSLGRYGV AGNMGLNFNE IQQEQTDHHH HHMGFQFHQI  240
AGGNNMNNLS GGILGGDHNN QWRNSNLQQI PFLVGTGFES STSTGLYPFQ TGDQGVDHQA  300
TTDPMVGNNS RVNTEQLPPP VKTEDNHGLT FTSTPISAET NNSQFWGGNL NAWTDLSGLN  360
SSSTSHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	3e-46	Dof family protein