PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP014842.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | GATA | ||||||||
Protein Properties | Length: 172aa MW: 19659.4 Da PI: 10.5301 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.2 | 1.9e-17 | 124 | 159 | 2 | 35 |
GATA 2 s..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 + nC++tk+p+WR+gp g+k+LCn CG++yrk+++ PCP014842.1 124 TnfNCRVTKSPMWRKGPLGPKSLCNRCGIRYRKMKM 159 5559*****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MDFGGVHRSQ LMNFAPQNQF NMEGTGSGLD LTLRLGLSSN NHGGDHFRPY LNEALPRASN 60 QFRFNYTNPA VGTTSKAYNV PKPPKPDDYC DIDITNKTSR TGGSRKRNLT KVRTVKPDEN 120 LICTNFNCRV TKSPMWRKGP LGPKSLCNRC GIRYRKMKMK EEMEKKEREQ LR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20750.1 | 2e-12 | GATA family protein |