PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014747.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GeBP

Protein Properties

Length: 385aa MW: 42103.4 Da PI: 9.3199

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014747.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	118.5	3.7e-37	88	186	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlw++eDei lLqG++d+++++g+ + ++d+ fy+++k++++++++ksqlveK+rrLKkK+++ +k++sgk++sf+++hdq +fe+s+kiW PCP014747.1 88 LFQRLWTDEDEIELLQGFLDYTTQRGSrgsHGQNDTALFYDQIKSKLQLDFNKSQLVEKLRRLKKKYRNVLSKIASGKDVSFKSPHDQATFEISRKIW 185 79*********************997634455************************************************************** PP DUF573 97 g 97 PCP014747.1 186 S 186 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MSSTPPPLPR HPPAPRILSP SPSPPPLLPS LSPFPLGPPP TVPLTLTSAP TTVIANDAVL 60 SSDPKRHPAL SSQPEEKKPA ALDDSRRLFQ RLWTDEDEIE LLQGFLDYTT QRGSRGSHGQ 120 NDTALFYDQI KSKLQLDFNK SQLVEKLRRL KKKYRNVLSK IASGKDVSFK SPHDQATFEI 180 SRKIWSNIGR IGADENALDD EDPPSNPNFS SYEIKAEEAA GFAGDKKSTP RSRKRSRIQP 240 RSDEKRPPPP LRGGFVEPSP VIKDNNNSIN ISNNGGAGGG NNCSNCNVQG LIEETVKSCL 300 SPLFKELLSN AMGGGQSRGF GGLAFNPIPL SFGGPPMNLN FGGGEVEDDK WRKQQILELE 360 VYSKRLDLVQ NQIKVALDEL RSNGG

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MSSTPPPLPR HPPAPRILSP SPSPPPLLPS LSPFPLGPPP TVPLTLTSAP TTVIANDAVL  60
SSDPKRHPAL SSQPEEKKPA ALDDSRRLFQ RLWTDEDEIE LLQGFLDYTT QRGSRGSHGQ  120
NDTALFYDQI KSKLQLDFNK SQLVEKLRRL KKKYRNVLSK IASGKDVSFK SPHDQATFEI  180
SRKIWSNIGR IGADENALDD EDPPSNPNFS SYEIKAEEAA GFAGDKKSTP RSRKRSRIQP  240
RSDEKRPPPP LRGGFVEPSP VIKDNNNSIN ISNNGGAGGG NNCSNCNVQG LIEETVKSCL  300
SPLFKELLSN AMGGGQSRGF GGLAFNPIPL SFGGPPMNLN FGGGEVEDDK WRKQQILELE  360
VYSKRLDLVQ NQIKVALDEL RSNGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	4e-74	GeBP family protein