PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014555.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 331aa    MW: 36328.6 Da    PI: 6.3767
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014555.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.44.6e-19247281135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  PCP014555.1 247 CSHCGVQKTPQWRTGPNGAKTLCNACGVRYKSGRL 281
                  *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MECVEAALKT SIRKEMALKA TGPQVVVFDD FLWGGAVVNG QNACDDFSVD DLLNFSNEDG  60
FIETEAEEEG DKEKVKDFVS VSPQKQNQET EKSNLSEKIE PASELSVPAD DLDNLEWLSH  120
FVEDSFSEFS TALPAGFLPE KPKSEKRPDL ETPFPEKPCF KTPVPAKARS KRSRTGGRVW  180
SLGSPSLTES SSSSSSSSSS SPSSPWTIYP ATQNQESVEP VLSVEKPPRK PKRRLVDGSS  240
SQPPRRCSHC GVQKTPQWRT GPNGAKTLCN ACGVRYKSGR LLPEYRPACS PTFSSELHSN  300
HHRKVIEMRR KKEGPGTPEP GMTIAPAVPS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-86GATA family protein