PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014181.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 577aa MW: 66912.7 Da PI: 4.5621

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014181.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	39.9	1.3e-12	5	102	2	93
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkya...tgkrknratksgyWkatgkdkev 92 p Gf+F+Ptd+++v +L k + +++ + +e ++e d++ + Pw+L ++ +++++++yfF++ ++ + + +r r+++ g+W++ +++ PCP014181.1 5 PYGFHFQPTDQQIVRLFLYKMAVKNQllaPPYSEYVHEEDLFGIkGPWELWEE-YGGDQDLYFFCELKRLNLadlHVRRIDRKIRGGTWREGDLNRHN 101 78****************999999887677788***9857744.57799***9998873334567788899**987666655 PP NAM 93 l 93 + PCP014181.1 102 T 102 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MARAPYGFHF QPTDQQIVRL FLYKMAVKNQ LLAPPYSEYV HEEDLFGIKG PWELWEEYGG 60 DQDLYFFCEL KRLNLADLHV RRIDRKIRGG TWREGDLNRH NTSSNNRCFK FNRAQTVLLP 120 VMTEVVDPEF QNLHRAAELR QMTVIGSAGG VVEETETASS RIEGEVKEES MTEGGSASKQ 180 RRQSLKAKWH RMRAKNCKTT DAKIDEVQFE NEEGNYQNVN KHTEQTDELD TISINEAQRE 240 FNKLFADEII KLDATFQKHI IGIDTVMSEE LFDEFKKANS IAEKRYITFK EMMAQPMDES 300 NRECLILGQT IKMLNSKVEK LLRIVEINKK NCNALDTEMS KMQTKTNANN LKIRSMATGL 360 VVLRSDISSL FVNGPINAKL IDAFFYVVSE NEMKERKEQN LYLSSYIFND VEIQRPKNDD 420 EYFDQRLKTI LEENVDKNKS VENLRENEVG EESQNFVGES HDDKIGGYVE KDVNDESHDQ 480 ENGDDLEENV GDESQDHENG GDVDLNVDDD HIGVEENIES FEPIFHLNIY DPIVWDGLNT 540 EMRDLLVEEG PIQETNLTYP KDKLSRKFSS YYYDRKL

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MARAPYGFHF QPTDQQIVRL FLYKMAVKNQ LLAPPYSEYV HEEDLFGIKG PWELWEEYGG  60
DQDLYFFCEL KRLNLADLHV RRIDRKIRGG TWREGDLNRH NTSSNNRCFK FNRAQTVLLP  120
VMTEVVDPEF QNLHRAAELR QMTVIGSAGG VVEETETASS RIEGEVKEES MTEGGSASKQ  180
RRQSLKAKWH RMRAKNCKTT DAKIDEVQFE NEEGNYQNVN KHTEQTDELD TISINEAQRE  240
FNKLFADEII KLDATFQKHI IGIDTVMSEE LFDEFKKANS IAEKRYITFK EMMAQPMDES  300
NRECLILGQT IKMLNSKVEK LLRIVEINKK NCNALDTEMS KMQTKTNANN LKIRSMATGL  360
VVLRSDISSL FVNGPINAKL IDAFFYVVSE NEMKERKEQN LYLSSYIFND VEIQRPKNDD  420
EYFDQRLKTI LEENVDKNKS VENLRENEVG EESQNFVGES HDDKIGGYVE KDVNDESHDQ  480
ENGDDLEENV GDESQDHENG GDVDLNVDDD HIGVEENIES FEPIFHLNIY DPIVWDGLNT  540
EMRDLLVEEG PIQETNLTYP KDKLSRKFSS YYYDRKL