PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014147.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 340aa    MW: 36789.9 Da    PI: 9.3125
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014147.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023148170123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C+ C++ Fs++  L  H++ H
  PCP014147.1 148 FTCNFCKRDFSTSQALGGHQNAH 170
                  89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MAEEHQSPSE ASNISGATDG TPPPKKDSPP PPPPPDLPDQ KMKMKMKEKI IIDDSDDDQP  60
QPKLKKPSAA AGSSSSLTPS SRALLHLKLS NNDPGHALGS SKELVLFNPL NQDSSLNPEG  120
LELLSQHKEP RNESPRGGDG RKPRTRAFTC NFCKRDFSTS QALGGHQNAH KQERALAKRR  180
QGGIGMDNLF GHSYRYHSPY VSITQHPLYG SYGRSLGVRM DSMIHKPSYP WSASTFGFGR  240
FGHGISAGSW SSSRPGGLMN NFQSSIDRLN LHGLHANTTQ TLGLPGTSSA SRFDQEIGSS  300
RNFGGSNFGI NRPIIAGDVL HHEPLEPDTD ASGLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.11e-17C2H2 family protein