PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014073.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 25767.1 Da    PI: 5.5084
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014073.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.91.3e-28959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k+i+n + rqvtfskRr g++KKAeELSvLCda++a+iifsstgkl+ey+s
  PCP014073.1  9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADIALIIFSSTGKLFEYAS 59
                 68***********************************************86 PP

2K-box501.3e-179217319100
        K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                   +++ L kei    +++R++ Ge+++ L+l+eLqqLe+ Le++l ++ +kK+e ++++i +lq+   +l een++Lr++++e
  PCP014073.1  92 SNYTMLSKEIAAKSHQLRQMRGEEIQGLNLEELQQLEKSLETGLGRVIEKKSEKIMKEIGDLQRNGMQLMEENERLRQEVAE 173
                  4677788888888999***************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADIALIIFSS TGKLFEYASS  60
SMKEILERHN LHSKNLEKPE QPSLQLQLVE NSNYTMLSKE IAAKSHQLRQ MRGEEIQGLN  120
LEELQQLEKS LETGLGRVIE KKSEKIMKEI GDLQRNGMQL MEENERLRQE VAEKADGRRL  180
VQVDSESMFT EEGQSSESVT NPCNSNNGPQ DYDSSDTSLK LGLPYSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-91MIKC_MADS family protein