PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014013.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 341aa    MW: 38444.1 Da    PI: 4.5672
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014013.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.22.4e-14107154354
          AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                   kGVr++k +g+++AeI+d +     +  r +lg+f taeeAa+a+ + ++++e
  PCP014013.1 107 PKGVRRRK-WGKYAAEIQDpF-----QgIRKWLGTFNTAEEAAAAYQQKKREFE 154
                  59***998.**********55.....45******************99998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MPGMKTVVLN QHMSWNKLKK KQPTMEENAG YMKRIRIIYN DPDATDYSSE DGEEYDIEGN  60
LFQHCKRFVS EILVVETECE SSAGTNGGKI GHRMGFDDSK KCNRVLPKGV RRRKWGKYAA  120
EIQDPFQGIR KWLGTFNTAE EAAAAYQQKK REFETIQSQQ KIKSRCRNIQ LSDTHEFESS  180
KLMEGAKHEL QGVPSSEESQ DSSFCHPSPS SVLEISGSAS LSFELEKLKE ESCVEVSGGE  240
GAVQQPVFEE EESIPMLPPL DVEQLNLGCK DNYVFSSLDQ FFDGMCGIVD DGTTDIVDYP  300
VCNDKKGEVI CLPPLDSDFG QQDFSWIDQK PEQVMSMKFC S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108114KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-22ERF family protein