PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013791.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 195aa    MW: 22219.1 Da    PI: 6.7398
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013791.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-18754253
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                 +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ +
  PCP013791.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRVWLGTFETAEDAARAYDEAARLM 54
                 69******9.**********8.....334*********************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MARSQQRYRG VRQRHWGSWV SEIRHPLLKT RVWLGTFETA EDAARAYDEA ARLMCGLKAR  60
TNFPYNPNEP MLHSSTLLSA ALMAKLHKCN MASLQMAKTT KPAVPKEEPQ EQVHVPLPST  120
TWITGKGDEK VRDYSGAEQW VDHGNWVGGD PQGVPHDHHH QQQEFIKPLQ DDHIEQMIEE  180
LLDYGYIEIC PGVSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.12e-53ERF family protein