PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP013664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 90aa MW: 9693.81 Da PI: 7.7389 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 104.6 | 6.2e-33 | 22 | 78 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 vrY eC+kNhAa++Gg+avDGC+Efm+s+geegt+aal+CaACgCHRnFHRreve+ PCP013664.1 22 VVRYGECQKNHAAAVGGYAVDGCREFMASNGEEGTTAALTCAACGCHRNFHRREVET 78 69****************************************************875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 90 aa Download sequence |
MRKRQVVLRR TEEASAASSF TVVRYGECQK NHAAAVGGYA VDGCREFMAS NGEEGTTAAL 60 TCAACGCHRN FHRREVETVC ECFSPSSNGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G28917.1 | 4e-29 | ZF-HD family protein |