PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013663.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 349aa    MW: 38019.6 Da    PI: 7.0059
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013663.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer109.32.1e-3463119358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                   v+YkeClkNhAa+lGgha+DGCgEfmps++++ +++++lkCaACgCHRnFHRr++e
  PCP013663.1  63 VVTYKECLKNHAATLGGHALDGCGEFMPSPTANsADPTSLKCAACGCHRNFHRRDPE 119
                  589****************************99999******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MDITPPITTT TNTASTKSPE ADSETPTRIQ QPIKPLSFGN GVLKRHNPTH HLHHHNIPIT  60
PVVVTYKECL KNHAATLGGH ALDGCGEFMP SPTANSADPT SLKCAACGCH RNFHRRDPED  120
PLQPNTPAAT THVIEYQPHH RHHPPPPTHP GNRSPNSASP PPISSSYYPS APHMLLALST  180
AHENALVGVN NHAAVMPPIV SPSTNARKRF RTKFTQDQKD KMHQFAERVG WKMQKRDEEI  240
VQEFCNEAGV EKGVLKVWMH NNKNTFTKRD VLNGGGAGGG LGRPNFLLQQ THHHNGTNGN  300
GNGNNNDDED EDDDDDQNDN DDNKNGVPNP NHHYQGADGG ANNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.18e-72ZF-HD family protein