PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013614.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 639aa MW: 68755.7 Da PI: 8.1216

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013614.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.6	1.8e-16	185	224	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PCP013614.1 185 RHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 224 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MRIWEANCAC WRLNLLEING AERNGLRSRA QEIGEAIGFH DAVSSVGECG GAGRTATATD 60 TVSGAAAATN LTGKTTVAFA FTVAAAGGGP FPEAVNAAAG DSAVSGSAES RAARKRSDSA 120 PGAQAFASCN CSNCHNNVDN EAARQDARGA ILERNPNAFQ PKIASSPQES RDGREDAGEI 180 QAAGRHNKGC HCKKSGCLKK YCECFQANIL CSENCKCMDC KNFEGSEERR ALYHEGHNTV 240 AYMQQANAAI SGAIGTSGYG TPLVSRKRKG YELYFTTGNQ STHPIAQSQQ ENHLRPPMTS 300 SSQLSVPIFH VANAAVSRPS KTTTYRSPLA DIIQPKNIKD LCSRLVVVAG AAAKALAGNR 360 QRETIDKTNA TSSTQEGNKH KMEHDKQHDD HIGVNQADRN ASRFSGSNGG DVQDSRPMSP 420 GTLALMCDEQ DKMFMEAGLP NGAGTDNPSM PQKSTQDIGF TEVYVEQERL VLTGFRDCLN 480 HLITRGSIKE TMCSPQAKRE RVSQKESVQV GTAKATTEPR YQKEAYSNGI VKSPLSSANG 540 KILQPVTTVT SGDNDLTLKA RSSRSRLSDC DVSEMEEARK LRSEFLQVLR SRRSGEVPML 600 VEPAKPVANP LFQEANPPSF SEVRIWFPFG NALYQFGTA

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MRIWEANCAC WRLNLLEING AERNGLRSRA QEIGEAIGFH DAVSSVGECG GAGRTATATD  60
TVSGAAAATN LTGKTTVAFA FTVAAAGGGP FPEAVNAAAG DSAVSGSAES RAARKRSDSA  120
PGAQAFASCN CSNCHNNVDN EAARQDARGA ILERNPNAFQ PKIASSPQES RDGREDAGEI  180
QAAGRHNKGC HCKKSGCLKK YCECFQANIL CSENCKCMDC KNFEGSEERR ALYHEGHNTV  240
AYMQQANAAI SGAIGTSGYG TPLVSRKRKG YELYFTTGNQ STHPIAQSQQ ENHLRPPMTS  300
SSQLSVPIFH VANAAVSRPS KTTTYRSPLA DIIQPKNIKD LCSRLVVVAG AAAKALAGNR  360
QRETIDKTNA TSSTQEGNKH KMEHDKQHDD HIGVNQADRN ASRFSGSNGG DVQDSRPMSP  420
GTLALMCDEQ DKMFMEAGLP NGAGTDNPSM PQKSTQDIGF TEVYVEQERL VLTGFRDCLN  480
HLITRGSIKE TMCSPQAKRE RVSQKESVQV GTAKATTEPR YQKEAYSNGI VKSPLSSANG  540
KILQPVTTVT SGDNDLTLKA RSSRSRLSDC DVSEMEEARK LRSEFLQVLR SRRSGEVPML  600
VEPAKPVANP LFQEANPPSF SEVRIWFPFG NALYQFGTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-108	CPP family protein