PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013440.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 532aa MW: 60800.4 Da PI: 4.9306

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013440.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	134	1.1e-41	24	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 l pGfrF Ptde l+++yLk+k++g++ ++ +vi+e+d++k+eP dLp + +ekew+fFs+ d ky +++r nrat++g+ k tgk++e+ ++ + PCP013440.1 24 LLPGFRFYPTDELLISYYLKNKIQGTDSHFRHVIPEIDVCKYEPCDLPaFFPQDHEKEWFFFSRPDYKYINSTRCNRATDQGFYKITGKEREIRAEeS 121 579*************************999***********445566888*********************************9856 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++++g k++L+fy+gr pk++ktdWv+hey l PCP013440.1 122 KAVIGKKRILTFYEGRVPKAKKTDWVVHEYYL 153 6779************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MSSSSISSCM TTEEGDAVHV NGILLPGFRF YPTDELLISY YLKNKIQGTD SHFRHVIPEI 60 DVCKYEPCDL PAFFPQDHEK EWFFFSRPDY KYINSTRCNR ATDQGFYKIT GKEREIRAEE 120 SKAVIGKKRI LTFYEGRVPK AKKTDWVVHE YYLSEIQVGS KPTKQMDFVL CRLKNNSASY 180 KKPKGYPIWG ELADSGANSE DDQAVVSDVL TEPVQHLGEK ELEISQVSLS FDDGDDETGV 240 WKFSDFDDPA MFLELCAEMG EILNSPSQPL QQTPQPHQPP HPHQPSQPHQ PQDYCPPTLQ 300 APLHTLPGNV SYVYGDCTRR QSLIPDNTSY LEYKNNISTC DPNEQVSKLN GDHDRATEEM 360 FSEAFFQPHE CMGPLFDPLQ DYLLLSPMNT ELGDDEPQQN CLQIIYPLHQ KPYVPQQDSL 420 QPSSIHWELL REESDCKSVS QDKVKEAAEY CIALHLPQKK AKTESLKQAT VGSAATWFLE 480 SQVCYNNQTL MLMYWLLVLK FEVPSVMEWR KEEGCSAAIG RSQSKSLPHH RI

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MSSSSISSCM TTEEGDAVHV NGILLPGFRF YPTDELLISY YLKNKIQGTD SHFRHVIPEI  60
DVCKYEPCDL PAFFPQDHEK EWFFFSRPDY KYINSTRCNR ATDQGFYKIT GKEREIRAEE  120
SKAVIGKKRI LTFYEGRVPK AKKTDWVVHE YYLSEIQVGS KPTKQMDFVL CRLKNNSASY  180
KKPKGYPIWG ELADSGANSE DDQAVVSDVL TEPVQHLGEK ELEISQVSLS FDDGDDETGV  240
WKFSDFDDPA MFLELCAEMG EILNSPSQPL QQTPQPHQPP HPHQPSQPHQ PQDYCPPTLQ  300
APLHTLPGNV SYVYGDCTRR QSLIPDNTSY LEYKNNISTC DPNEQVSKLN GDHDRATEEM  360
FSEAFFQPHE CMGPLFDPLQ DYLLLSPMNT ELGDDEPQQN CLQIIYPLHQ KPYVPQQDSL  420
QPSSIHWELL REESDCKSVS QDKVKEAAEY CIALHLPQKK AKTESLKQAT VGSAATWFLE  480
SQVCYNNQTL MLMYWLLVLK FEVPSVMEWR KEEGCSAAIG RSQSKSLPHH RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	4e-40	NAC family protein