PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013435.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 408aa MW: 45604.3 Da PI: 4.6841

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013435.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	126.3	2.5e-39	17	143	3	127
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 pGfrFhP+de lv++yLk+k++g++ ++ vi+e+d++k+ePw++p + +ekew+fFs+ + k ++r+nrat++g+ k+tg ++e+ ++ +++ PCP013435.1 17 PGFRFHPSDESLVSYYLKNKIQGTDSHFRYVIPEIDVCKYEPWEIPaFFPEVHEKEWFFFSPPKYKDIDKTRRNRATDQGFYKSTGDEREIRAEeSQA 114 9**********************999999***********545556899*********************************985566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyr 127 ++g k+ L+f++gr k++ktdWv+he++ PCP013435.1 115 VIGKKRFLTFHEGRGLKAKKTDWVIHEFT 143 79***********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MTTEEGDAVH VNVIPLPGFR FHPSDESLVS YYLKNKIQGT DSHFRYVIPE IDVCKYEPWE 60 IPAFFPEVHE KEWFFFSPPK YKDIDKTRRN RATDQGFYKS TGDEREIRAE ESQAVIGKKR 120 FLTFHEGRGL KAKKTDWVIH EFTEIEAGSF VICLLKNRSP TYKKPKGDPI CGKLADSGAN 180 SKDNQAAVCD LIPKPVEHLG YKGRGDVNSS ESPDGSHLID SNNILSFDDE TGDGKFPDLD 240 DPAASAGFLG LLAENEEILN SPPQTPHQTP QDYLSSTFLS SGNIQLGAVL QANGTSDDCN 300 TIQSPFGDNN YSSTDKNDIS TCDEGEPHSF TFENKAADDM SQEACVQPEK YLGGILYADI 360 CDNGYNNWQP TCWDKDSSLK NISTNVKDKQ FSSIASNFEN QTTNKRKR

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MTTEEGDAVH VNVIPLPGFR FHPSDESLVS YYLKNKIQGT DSHFRYVIPE IDVCKYEPWE  60
IPAFFPEVHE KEWFFFSPPK YKDIDKTRRN RATDQGFYKS TGDEREIRAE ESQAVIGKKR  120
FLTFHEGRGL KAKKTDWVIH EFTEIEAGSF VICLLKNRSP TYKKPKGDPI CGKLADSGAN  180
SKDNQAAVCD LIPKPVEHLG YKGRGDVNSS ESPDGSHLID SNNILSFDDE TGDGKFPDLD  240
DPAASAGFLG LLAENEEILN SPPQTPHQTP QDYLSSTFLS SGNIQLGAVL QANGTSDDCN  300
TIQSPFGDNN YSSTDKNDIS TCDEGEPHSF TFENKAADDM SQEACVQPEK YLGGILYADI  360
CDNGYNNWQP TCWDKDSSLK NISTNVKDKQ FSSIASNFEN QTTNKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	4e-36	NAC family protein