PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013433.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 316aa MW: 36182.2 Da PI: 4.7313

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013433.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	133.4	1.5e-41	15	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 p+GfrF Pt eelv++yLk k ++++++ ++i+e+d+++++PwdL +++ +++ wy Fs++d ky +++r+nrat g Wk tgk+++++++ +++ PCP013433.1 15 PVGFRFYPTPEELVDHYLKLKKQDNDFKS-DHIAEFDVCNFDPWDLAARIPSDDMVWYIFSRKDYKYINSTRSNRATPGGHWKITGKERAIKARrSKA 111 89***********************99.89**********99999999**********************************985666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g k+tL+fy+ +pk++ktdWvmhe+ l PCP013433.1 112 VIGKKRTLTFYQRCQPKPKKTDWVMHEFYL 141 79***********************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MGSNRKTRGG GASDPVGFRF YPTPEELVDH YLKLKKQDND FKSDHIAEFD VCNFDPWDLA 60 ARIPSDDMVW YIFSRKDYKY INSTRSNRAT PGGHWKITGK ERAIKARRSK AVIGKKRTLT 120 FYQRCQPKPK KTDWVMHEFY LIDSEAISNP KLHQNDFVLC RMKKNSDMED TSIGEVELGS 180 SSVSNVEDHA AAVVTPEDYS SSTFLSSGYI ELGDIPHGND NIDDCNAMQS PFGYNNYSYP 240 DKNDISTCDE GEPLGFTMFD FENEVPDHMS QEVCPPREEN LELFFYPPQP EDYTLEPLMN 300 MTVGNVLHDN EFRSPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	1e-39	NAC family protein