PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013432.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 361aa MW: 41597 Da PI: 4.5602

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013432.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	119.2	3.8e-37	17	144	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 +G+rF+Pt ee+v++yLk k ++k ++ ++i+e+d+++++PwdL +++ +++ wyfFs+++ ky +++r nr+t g Wk gk+++v+++ ++ + PCP013432.1 17 VGVRFNPTPEEMVDHYLKLKKQDKGFKS-DHIAEFDVCNFDPWDLAARIPSDDMVWYFFSPKEYKYINSTRYNRTTPGGQWKMAGKERPVKARlSKDV 113 7************************9.89**********99999999***********************************988889 PP NAM 100 vglkktLvfyk..grapkgektdWvmheyrl 128 +g k+tL+fy+ g ++k +kt+Wv hey+l PCP013432.1 114 IGKKRTLTFYQrcGPQRKLKKTNWVRHEYSL 144 ******6336788889*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MGTQGSNRKT GGVSDAVGVR FNPTPEEMVD HYLKLKKQDK GFKSDHIAEF DVCNFDPWDL 60 AARIPSDDMV WYFFSPKEYK YINSTRYNRT TPGGQWKMAG KERPVKARLS KDVIGKKRTL 120 TFYQRCGPQR KLKKTNWVRH EYSLIDSEAA ISNPKLRQKD FVLNRMKKEF DEEDTSIDEV 180 ELGSYSASNV EDHAAAVVTP KSQDYSSSTF LSSGYIELGD VLQANDTNYD CNAIQSPFGD 240 NHYSYIDKNN ISTYDKGDLF TMSDFENELP DDMCQEPRVG DFYSYFTYKN NISTNAENEA 300 VSYTAYDFEN QNVDDMIQEV CLPREEDLEL AFYLPQLEDY TLEPPINKKV GDVLHDNNYV 360 Y

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MGTQGSNRKT GGVSDAVGVR FNPTPEEMVD HYLKLKKQDK GFKSDHIAEF DVCNFDPWDL  60
AARIPSDDMV WYFFSPKEYK YINSTRYNRT TPGGQWKMAG KERPVKARLS KDVIGKKRTL  120
TFYQRCGPQR KLKKTNWVRH EYSLIDSEAA ISNPKLRQKD FVLNRMKKEF DEEDTSIDEV  180
ELGSYSASNV EDHAAAVVTP KSQDYSSSTF LSSGYIELGD VLQANDTNYD CNAIQSPFGD  240
NHYSYIDKNN ISTYDKGDLF TMSDFENELP DDMCQEPRVG DFYSYFTYKN NISTNAENEA  300
VSYTAYDFEN QNVDDMIQEV CLPREEDLEL AFYLPQLEDY TLEPPINKKV GDVLHDNNYV  360
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	3e-32	NAC family protein