PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013291.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 319aa    MW: 35061.4 Da    PI: 6.4013
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013291.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.68.6e-19238271134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  Cs+C++ kTp+WR gp g+ktLCnaCG+++++ +
  PCP013291.1 238 CSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGR 271
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MEARALKSSL RRELAVKSTQ HVLLEELWCA TGISGVPCED FSVDDLLDLS NGEFGDGYVE  60
EEGEERDSVS VDDETSNSSN SVLADSDSGL ATQLLVPDDD LAELEWVSHF VDDSLPDLSL  120
LHTIGVQKPE ALPANRSEPE PKPAQLRASL FPFEVPVKPR TKRCRLASRD WSLSSSSSPS  180
SPSSSSGSGF SFSTPCLIFN PVQSMHVFVG EPAAKKQKKK PAVQTGEGSI GGQFQRRCSH  240
CQVQKTPQWR TGPLGPKTLC NACGVRFKSG RLFPEYRPAC SPTFSGDVHS NSHRKVLEMR  300
KRKEIGEPEP RLNRMIRSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-59GATA family protein