PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013274.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 366aa MW: 41248.9 Da PI: 6.0853

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013274.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	60.9	4.2e-19	15	128	8	128
NAM 8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 + tdeel L+k ++g++l+ +vi++v+ y++ P++Lp + +++ k ++F+++++++ t+ g W+a+g+ +++s ++++ g PCP013274.1 15 QCTDEELC-MSLEKILDGSRLPG-NVIRDVNPYRCAPSNLPGyfsCPSNGCKyGFWYFIRSSESN--------PTNIGQWRAKGEASRIFS-NSSVYG 101 669**9.56*******9.99***********624322222232334555554443........36789*********.999* PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 + tL fy+ +ap+ +kt+Wvm+ey + PCP013274.1 102 WRATLEFYQCQAPHETKTNWVMQEYWI 128 *************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MYPQSAALPA DISLQCTDEE LCMSLEKILD GSRLPGNVIR DVNPYRCAPS NLPGYFSCPS 60 NGCKYGFWYF IRSSESNPTN IGQWRAKGEA SRIFSNSSVY GWRATLEFYQ CQAPHETKTN 120 WVMQEYWITQ KKSSESSKLK DVWSLCRVFL GDDETPNSKK LQELVNSDRA SHSTHSVVPR 180 VEDRGSTSKP RVENEASNDR ETGTLVVTER LPVRDDNVQI MHENDYLSRG DYLELLDLDT 240 PASHSFSSVS SCLTMSSDEC FDSLALLEEL EPKSKQELVT NNNELVVLAS SAGSFDKSRE 300 EERTRNRSPN PGSSVCAKIV TENSSKNMSR KQKSDDRNEG PSNSQNANVG GTKRLKRKKY 360 FCFMPF

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MYPQSAALPA DISLQCTDEE LCMSLEKILD GSRLPGNVIR DVNPYRCAPS NLPGYFSCPS  60
NGCKYGFWYF IRSSESNPTN IGQWRAKGEA SRIFSNSSVY GWRATLEFYQ CQAPHETKTN  120
WVMQEYWITQ KKSSESSKLK DVWSLCRVFL GDDETPNSKK LQELVNSDRA SHSTHSVVPR  180
VEDRGSTSKP RVENEASNDR ETGTLVVTER LPVRDDNVQI MHENDYLSRG DYLELLDLDT  240
PASHSFSSVS SCLTMSSDEC FDSLALLEEL EPKSKQELVT NNNELVVLAS SAGSFDKSRE  300
EERTRNRSPN PGSSVCAKIV TENSSKNMSR KQKSDDRNEG PSNSQNANVG GTKRLKRKKY  360
FCFMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-22	NAC family protein