PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP013252.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 347aa MW: 39116.6 Da PI: 9.4718 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.5 | 1.3e-49 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhP+deel+v+yL++k+ +++l++ + i+e+d+yk++Pw+Lp+k+ +e+ewyfFs+r++ky++g+r+nr+++ gyWka g+dk++l++ + PCP013252.1 15 LPPGFRFHPSDEELIVHYLRNKMISHPLPA-QLITEIDLYKYNPWELPSKALFGEDEWYFFSPRHRKYPNGERPNRTAAVGYWKAAGSDKPILTScGL 111 79****************************.89***************87778999********************99***************99777 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g+kk Lvfy+grapkg+kt+W+m+eyrl PCP013252.1 112 KRIGVKKALVFYTGRAPKGVKTEWIMNEYRL 142 88***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MEKEPAFTTY STMQLPPGFR FHPSDEELIV HYLRNKMISH PLPAQLITEI DLYKYNPWEL 60 PSKALFGEDE WYFFSPRHRK YPNGERPNRT AAVGYWKAAG SDKPILTSCG LKRIGVKKAL 120 VFYTGRAPKG VKTEWIMNEY RLLHCTVNPS RCKGSMRLDD WVLCRVQQRG STTKNTCNAQ 180 DIYNTEFGRC LPKSGPTVRP TNPIHRADII TDFLYKDCRV LASILAGQPP SPIETSSASF 240 QGSKDSYPVG SNNKVKSTVS ISSSGINSTL KRKIREENTK EDLFPLINLE SKNKDGNVLP 300 SKKLAAGNVV NCYIPNHLQN DIPKANPTVP ANFEEFNEMA FLATYSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 5e-74 | NAC family protein |