PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP013147.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C3H | ||||||||
Protein Properties | Length: 598aa MW: 66656.8 Da PI: 6.7406 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.8 | 1.4e-06 | 305 | 327 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 +lC f +G C++G++C+F H+ PCP013147.1 305 RLCFKFVSSGSCPRGESCNFQHD 327 566667778*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 598 aa Download sequence |
MAPPKILLSG DVSGNLKQLF KRVVSVNKSA AGPFDALLCV GQFFPYVADQ LDEFNDYIEG 60 RAQIPLPTYF IGDYGVSAAK VLLAATRDAG NQGFKLDGLK ICDNLYWLKG SGKFTLHGLS 120 VAYLSGQQYS DSQQFGTYNQ DDVDVLRAIA EEPGIIDFGI TNRANTSDVP PVAYEPFGSD 180 NIVAELVAEI KPRYHIAGTK GVFYAREPYS NVEAVHVTRF LGLAPVGNKD KQKFIHALSP 240 TPASTMSAVE IRTKSTTTTL SPYTYEEKTA HSMEAGKRSS DSISDSQYWR YDVSQKRQKH 300 GDGNRLCFKF VSSGSCPRGE SCNFQHDVDA REQSLRGVCF EFMNKGKCER GPDCKFKHSL 360 QDEGESNSQQ RRGSGNANSN RSTECWFCLS SPKVESHLII SIGEHYYCAL AKGPLVEDHV 420 LLIPIGHSPN TVSLPSECEI ELDKFQNALK KYYNKQGKEV VFFEWASRRT THANLQAVPV 480 PSAKAADVKN IFNLAAERQG FKFTTMKSSN NYDGRTLLGE QFDRNFSFFY AQLPDGTILS 540 HSIEENEKFL PQFGRQVMAG LLKKADRDDW KNCTDSKEEE TKMVEDFKSG FGEFDPNK |