PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013140.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 359aa    MW: 38898.5 Da    PI: 9.2719
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013140.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.7e-19211244134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  PCP013140.1 211 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 244
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MAPPPYHNLS PPSPFTLELS GDHHGDHDLQ YHHLFNLEPQ ASFFSSSSLS SPLFLTPAQV  60
QGPSDDHYRE PHQFQFQLLE ADHNIVPHGG SHDHDHEAIE NEGGNGTVLK LSISKNGAVG  120
NGNPGTDHET NTSSVKWMSS KMRMMRKMSN PDQTSSSSTS SDDKPISMKL SSHKFEEQKL  180
QHPSSQLGAD MISCSNNSSN NMNNVPIIRV CSDCNTTKTP LWRSGPRGPK SLCNACGIRQ  240
RKARRAMAAA AAAASGTTLT VAAPSMKSSK VQPKDNKSRI SSTVPFKKRP YNKLSSSPSS  300
RGKSKKLCFE DFTISMKNNS SSGNPTAATT TTALQRVFPQ DEKEAAILLM ALSCGLVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-18GATA family protein