PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP013107.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 28047 Da PI: 8.6987 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.2 | 7e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+ey++ PCP013107.1 9 KRIENKINRQVTFSKRRTGLLKKAHEISVLCDAQVALIVFSNKGKLFEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 102.1 | 7.6e-34 | 81 | 174 | 7 | 100 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ + + + +++ e+++Lk+++e Lqr++Rh+lGedL+sL+lke+q+LeqqL+++lk+iR +Kn+l++e+i+elq+k k++qeen+ L kk++e PCP013107.1 81 VEPDFESQGNWTFEYSRLKAKVEVLQRNHRHYLGEDLDSLNLKEIQNLEQQLDTALKQIRLRKNQLMHESISELQRKRKAIQEENNLLAKKIKE 174 5545566789*********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRTGLLK KAHEISVLCD AQVALIVFSN KGKLFEYATD 60 SCMEQILERY ERYSYAERQL VEPDFESQGN WTFEYSRLKA KVEVLQRNHR HYLGEDLDSL 120 NLKEIQNLEQ QLDTALKQIR LRKNQLMHES ISELQRKRKA IQEENNLLAK KIKEKEKAAA 180 QPQVQNWEQQ NHGLDLLPQP LPCLNNGGTQ QDEFLQVRRN QLDLTLEPLY ECHLGCFAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-106 | MIKC_MADS family protein |