PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012945.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 389aa MW: 44372 Da PI: 6.3699

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012945.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	316	351	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ PCP012945.1 316 YKWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 351 4679*****************************885 PP
2	ELK	37.8	4.1e-13	271	292	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s PCP012945.1 271 ELKNHLLRKYSGYLSSLKQELS 292 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEDYNNQMDH ESSGGRGNFL YASPNLGGNY GRAASDHQMG INTFHLQSSG GGGGGGSGSG 60 DQCNFQSPGA HPINVKTEAT TSQHGHPKFH YNNNNNNHHH HLVSSSRGHQ PVVHQLQHNL 120 DLQNDDHSLS SNEVEAIKAK IIAHPQWELH LMLCLDSQLP DRSLRHDSDL QELQEKTSKD 180 PELDQFMEAY YDMLVKYREE LTRPIQEAMD FMRRIETQLN MLGNNNNAPP LRIFSPSEDK 240 CEGIGSSEDE QENSGGETEV PEIDPRAEDR ELKNHLLRKY SGYLSSLKQE LSKKKKKGKL 300 PKEARQKLLS WWELHYKWPY PSESEKVALA ESTGLDQKQI NNWFINQRKR HWKPSEDMQF 360 MVMDGLHPQN AALYMDGHYT GDVHYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEDYNNQMDH ESSGGRGNFL YASPNLGGNY GRAASDHQMG INTFHLQSSG GGGGGGSGSG  60
DQCNFQSPGA HPINVKTEAT TSQHGHPKFH YNNNNNNHHH HLVSSSRGHQ PVVHQLQHNL  120
DLQNDDHSLS SNEVEAIKAK IIAHPQWELH LMLCLDSQLP DRSLRHDSDL QELQEKTSKD  180
PELDQFMEAY YDMLVKYREE LTRPIQEAMD FMRRIETQLN MLGNNNNAPP LRIFSPSEDK  240
CEGIGSSEDE QENSGGETEV PEIDPRAEDR ELKNHLLRKY SGYLSSLKQE LSKKKKKGKL  300
PKEARQKLLS WWELHYKWPY PSESEKVALA ESTGLDQKQI NNWFINQRKR HWKPSEDMQF  360
MVMDGLHPQN AALYMDGHYT GDVHYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-116	TALE family protein