PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012822.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C3H
Protein Properties Length: 346aa    MW: 38234.8 Da    PI: 9.8209
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012822.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.93.5e-08299319526
                  --SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  +C +far G+Ck G++C+F Hg
  PCP012822.1 299 PCLYFAR-GYCKNGASCRFLHG 319
                  8******.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MRSNHRDEYV ITELNTVEWT ASDSPKILVP KAVAASGART LVHRRYVCTR VQELRENWNA  60
IQSGSLSFSS SSIKSGCISS QKPENGVVLH ERSGQTQSSA STSGQQPRNR DSCGLNDIDK  120
AWKMMEIAKS RMHTGKKCSG SSVNTTSDSR KRTNPTTWSL RSEKKPSSSM FEQVEEKNPS  180
CPAMVPKPAD DARTVSNKTT AVTDEQAAAF PSLHNAAATA DVRQKPKQRQ QLRHVFAVIN  240
TLQQQHEAVQ KWQHPHVFLQ PKSEENQNTQ ELRSPLHRRS CSVSDVSLED PNSGFGWKPC  300
LYFARGYCKN GASCRFLHGG RLGDAVVDSG GQLLACKSLS SSPWPP