PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012294.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 281aa    MW: 31586.7 Da    PI: 7.7843
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012294.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.34.9e-26121411127
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                  l+pG+rF P+de+l+++yL  k +++       + i+e+d+y+++P +Lp +   ++ ++ ++ ++F+ + +       k+r +ksgyW+ +g+ ++v
  PCP012294.1  12 LAPGCRFYPSDEQLLCYYLSSKNASEAgkSGGYDLIRELDLYEHDPFELPdSacySYGHGGRKRHWFCYTVRVL-----KERRAKSGYWRRKGRVRDV 104
                  579*******************9888854444678**************9545553333555566666665543.....3455699************ PP

          NAM  93 lsk.kgelvglkktLvfykgrap.kgektdWvmheyr 127
                  l + ++ + g + ++vfy g++p ++++tdWv+ +y+
  PCP012294.1 105 LGRgGKVVLGRRSSFVFYLGNSPnDAVRTDWVLYQYA 141
                  **95555689********886551678*********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGDPKATSLL SLAPGCRFYP SDEQLLCYYL SSKNASEAGK SGGYDLIREL DLYEHDPFEL  60
PDSACYSYGH GGRKRHWFCY TVRVLKERRA KSGYWRRKGR VRDVLGRGGK VVLGRRSSFV  120
FYLGNSPNDA VRTDWVLYQY AQVDHVKAAF VLCRIFVRSG SGNRISDHGL SSCAEESACT  180
VRHIGIQHDG FHAPNINENE KHGDTSVPRK KEMSKYPLRL DRELDDRVMT GPVSISRIQP  240
SEQVPESVLG GSNPILLDNL AAKHVLCIME GDFIELDDLI D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.23e-20NAC family protein