PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012178.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 355aa    MW: 38943.4 Da    PI: 9.4551
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012178.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.63.4e-18216249134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  Cs C+t++TplWR+gp+g+k+LCnaCG+++rk +
  PCP012178.1 216 CSDCNTSTTPLWRSGPRGPKSLCNACGIRQRKAR 249
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MTPVYLNPPS SPFSHVEQAN DQDQRLKLFI SSSYNNQAAA SSCSSLISSF PTFFDSFEDQ  60
RAGSSTTTTL GHDHSLQYHH KTENHMWDCG TSTYDQASSP SSLVRPHVVD VMSTKDYRLM  120
SAYADHEREI NGRGGEVGKS NNNIRPRAVK WMSSKMRLMQ KMTNPDLAPA GTTENHILAA  180
AENAEHKFQV VQHQENSDQT SFSRNSNNTT PDVRVCSDCN TSTTPLWRSG PRGPKSLCNA  240
CGIRQRKARR TMAEAAAAAA NGFVVGATDT SSAKGKVANK EKKPRGSHSA NVTRCKNKSK  300
LIVTDTASVS PNNKINSNNN KICFKRLGFQ RVFPQDVAEA AILLMELSCG LINHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-24GATA family protein