PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012002.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family S1Fa-like
Protein Properties Length: 76aa    MW: 8365.1 Da    PI: 10.608
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA123.95.4e-391276670
         S1FA  6 veakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                  +akGlnPG+ivl+vv gll++flvgny+lyvyaq++lP +kkkPvskkklk+e+lkqGv++PGe
  PCP012002.1 12 SDAKGLNPGMIVLIVVVGLLVIFLVGNYALYVYAQRTLPLKKKKPVSKKKLKKERLKQGVSAPGE 76
                 589*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MADQFEDKVP PSDAKGLNPG MIVLIVVVGL LVIFLVGNYA LYVYAQRTLP LKKKKPVSKK  60
KLKKERLKQG VSAPGE